RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SRP19P09132 144 aaKnown RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 ZNF705DP0CH99 300 aaPredicted RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 COL8A2P25067 703 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 CRYBB3P26998 211 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 ERP29P30040 261 aaKnown RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 RPL27AP46776 148 aaKnown RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 RAB13P51153 203 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 KLF3P57682 345 aaPredicted RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 LGALSLQ3ZCW2 172 aaPredicted RBP2.88□□□□□ -1.95
SMC5-203ENST00000475540 SDIM1Q6ZPB5 146 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 SMIM20Q8N5G0 67 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 OR11H1Q8NG94 326 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 RASSF5Q8WWW0 418 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 GPR146Q96CH1 333 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 PARVBQ9HBI1 364 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 C19orf12Q9NSK7 152 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 FBXL12Q9NXK8 326 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 UFC1Q9Y3C8 167 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 OTOFQ9HC10 1997 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 NUP205Q92621 2012 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 PTPRJQ12913 1337 aa2.88□□□□□ -1.95
SMC5-203ENST00000475540 ROBO3Q96MS0 1386 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 SHANK1Q9Y566 2161 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 A0A087WUU8 490 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 TRAPPC13A5PLN9 417 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 HMGB3O15347 200 aaKnown RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 IDO1P14902 403 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 GABRA2P47869 451 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 TAS2R20P59543 309 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 DEFA1P59665 94 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 RBX1P62877 108 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 DHRS2Q13268 280 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 ALX1Q15699 326 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 LGALS9BQ3B8N2 356 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 IBA57Q5T440 356 aaKnown RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 LGALS9CQ6DKI2 356 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 GRINAQ7Z429 371 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 OR13C8Q8NGS7 320 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 LMX1AQ8TE12 382 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 RNASE6Q93091 150 aaKnown RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 ERMAPQ96PL5 475 aaPredicted RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 C20orf27Q9GZN8 174 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 ABCG5Q9H222 651 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 ZNF443Q9Y2A4 671 aaPredicted RBP2.87□□□□□ -1.95
SMC5-203ENST00000475540 DSCAML1Q8TD84 2053 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 ADAMTSL1Q8N6G6 1762 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 NACADO15069 1562 aa2.87□□□□□ -1.95
SMC5-203ENST00000475540 FHAD1B1AJZ9 1412 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 IGSF23A1L1A6 192 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 G3V2T6 193 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 ZNF682O95780 498 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 CRHP06850 196 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 P0C880 135 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 INAFM2P0DMQ5 153 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 CRHBPP24387 322 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 BLVRBP30043 206 aaPredicted RBP2.86□□□□□ -1.95
SMC5-203ENST00000475540 ARPC4P59998 168 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 AKR1C8PQ5T2L2 129 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 ZNF660Q6AZW8 331 aaPredicted RBP2.86□□□□□ -1.95
SMC5-203ENST00000475540 WDR59Q6PJI9 974 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 SSX8Q7RTT4 187 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 STX19Q8N4C7 294 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 ZNF283Q8N7M2 679 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 RPS4Y2Q8TD47 263 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 GPR119Q8TDV5 335 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 DYDC1Q8WWB3 177 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 TVP23CQ96ET8 276 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 SMDT1Q9H4I9 107 aa2.86□□□□□ -1.95
SMC5-203ENST00000475540 MIA2Q96PC5 1412 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 TRAV9-1A0A075B6T8 112 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 DPRXA6NFQ7 191 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 C17orf51A8MQB3 221 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 OR11H12B2RN74 326 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 LY6HO94772 140 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 C1QBP02746 253 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 SMIM10L2AP0DMW4 78 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 SMIM10L2BP0DMW5 78 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 CCL3P10147 92 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 SPI1P17947 270 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 HBA1P69905 142 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 MOGQ16653 247 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 ZNF439Q8NDP4 499 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 OR11H2Q8NH07 326 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 MUC7Q8TAX7 377 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 GPER1Q99527 375 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 MIXL1Q9H2W2 232 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 EFCAB1Q9HAE3 211 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 XAGE1AQ9HD64 81 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 LYRM2Q9NU23 88 aaPredicted RBP2.85□□□□□ -1.95
SMC5-203ENST00000475540 NLRC5Q86WI3 1866 aa2.85□□□□□ -1.95
SMC5-203ENST00000475540 YTHDC2Q9H6S0 1430 aaKnown RBP2.85□□□□□ -1.95
SMC5-203ENST00000475540 I3L521 148 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 GPR31O00270 319 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 UBFD1O14562 309 aaKnown RBP2.84□□□□□ -1.95
SMC5-203ENST00000475540 CPMP14384 443 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 S100A7P31151 101 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 PHBP35232 272 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms