RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 IGLV2-14P01704 120 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 HBG1P69891 147 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 HBG2P69892 147 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 LINC00596Q86U02 117 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 NIT1Q86X76 327 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 RCHY1Q96PM5 261 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 IL19Q9UHD0 177 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 PPP1R3CQ9UQK1 317 aa10.83□□□□□ -0.68
CCNL1-216ENST00000475298 NDUFB4O95168 129 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 GRPP07492 148 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 SLC25A6P12236 298 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 DEFA4P12838 97 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 HOXC12P31275 282 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 AMTP48728 403 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 CXorf67Q86X51 503 aaPredicted RBP10.82□□□□□ -0.68
CCNL1-216ENST00000475298 PNKDQ8N490 385 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 SLC25A40Q8TBP6 338 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 RTL8AQ9BWD3 113 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 CUL9Q8IWT3 2517 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 SAA2-SAA4A0A096LPE2 208 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 TRBV6-6A0A0A6YYG2 114 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 RNF212BA8MTL3 300 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 TAX1BP3O14907 124 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 IGKV1-39P01597 117 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 TFF1P04155 84 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 IGKV1D-39P04432 117 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF83P51522 516 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 CCL11P51671 97 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 LRRC10Q5BKY1 277 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 FAM53AQ6NSI3 398 aaPredicted RBP10.82□□□□□ -0.68
CCNL1-216ENST00000475298 SMIM12Q96EX1 92 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 SVILO95425 2214 aa10.82□□□□□ -0.68
CCNL1-216ENST00000475298 ODAMA1E959 279 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 FCN1O00602 326 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 AGFG2O95081 481 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 SERPINE2P07093 398 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF16P17020 682 aaPredicted RBP10.81□□□□□ -0.68
CCNL1-216ENST00000475298 KITLGP21583 273 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 TIMP3P35625 211 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 MPV17P39210 176 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 ATP5G3P48201 142 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 TRIP6Q15654 476 aaKnown RBP10.81□□□□□ -0.68
CCNL1-216ENST00000475298 TMEM178AQ8NBL3 297 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 TRIB1Q96RU8 372 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 KCNS2Q9ULS6 477 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 PMCHP20382 165 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 THBS3P49746 956 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 RIPPLY3P57055 190 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 SLC38A11Q08AI6 406 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 PSG7Q13046 419 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 CNEP1R1Q8N9A8 125 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 OR10G8Q8NGN5 311 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
CCNL1-216ENST00000475298 KCNS1Q96KK3 526 aa10.81□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF430Q9H8G1 570 aaPredicted RBP10.81□□□□□ -0.68
CCNL1-216ENST00000475298 LRP5LA4QPB2 252 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 IER3P46695 156 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 ERVK11-1P61568 191 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF90Q03938 601 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 HLA-DRB5Q30154 266 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 SPANXN5Q5MJ07 72 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 LCN12Q6JVE5 192 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 PRR27Q6MZM9 219 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF497Q6ZNH5 498 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF826PQ6ZT77 177 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 FDCSPQ8NFU4 85 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 FZR1Q9UM11 496 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 CNOT1A5YKK6 2376 aaKnown RBP10.8□□□□□ -0.68
CCNL1-216ENST00000475298 CACNA1DQ01668 2161 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 K7ERU9 68 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 WNT9BO14905 357 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 PDE6DO43924 150 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 WT1P19544 449 aaPredicted RBP10.8□□□□□ -0.68
CCNL1-216ENST00000475298 LGALS4P56470 323 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 OR4A47Q6IF82 309 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF596Q8TC21 504 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 SFXN3Q9BWM7 321 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 MEGF9Q9H1U4 602 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
CCNL1-216ENST00000475298 TRAV9-1A0A075B6T8 112 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 SLC17A3O00476 420 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
CCNL1-216ENST00000475298 CA2P00918 260 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 REG1AP05451 166 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 VWA1Q6PCB0 445 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 NEUROG1Q92886 237 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.79□□□□□ -0.68
CCNL1-216ENST00000475298 PSPNO60542 156 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms