RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 RBP4P02753 201 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 RAB11AP62491 216 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 PUSL1Q8N0Z8 303 aaKnown RBP14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 LY6G5BQ8NDX9 201 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 TMEM170AQ8WVE7 144 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 PCGF1Q9BSM1 259 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 SSBP3Q9BWW4 388 aaPredicted RBP14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 IGHV3-72A0A0B4J1Y9 119 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 TEX50A0A1B0GTY4 177 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 SMCO3A2RU48 225 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 BTBD17A6NE02 478 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 CD1BP29016 333 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 GPR6P46095 362 aaPredicted RBP14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 RAB13P51153 203 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 TMEM41BQ5BJD5 291 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 SLC24A4Q8NFF2 622 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 PLEKHA3Q9HB20 300 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 FKBP11Q9NYL4 201 aa14.84□□□□□ -0.03
SEC61A2-213ENST00000475268 ENSAO43768 121 aaKnown RBP14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 NPY1RP25929 384 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 RAB2AP61019 212 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 PRCDQ00LT1 54 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 CENPVQ7Z7K6 275 aaPredicted RBP14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 ZNF709Q8N972 641 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 RARRES2Q99969 163 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 NPCDR1Q9BY65 106 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 NKX6-2Q9C056 277 aaPredicted RBP14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 BUB1B-PAK6H3BSN5 160 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 HBE1P02100 147 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 MC5RP33032 325 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 ARF6P62330 175 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 PNKDQ8N490 385 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 SUN5Q8TC36 379 aa14.83□□□□□ -0.04
SEC61A2-213ENST00000475268 USP24Q9UPU5 2620 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 CACNA1BQ00975 2339 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 LOC105371242A0A075B767 164 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 CA2P00918 260 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 M6PRP20645 277 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 ZNF726P1Q15940 193 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 ACSM6Q6P461 480 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 LCN15Q6UWW0 184 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 COMMD5Q9GZQ3 224 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 KIAA1456Q9P272 454 aa14.82□□□□□ -0.04
SEC61A2-213ENST00000475268 RBFOX3A6NFN3 312 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 PRSS46E5RG02 174 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 MDKP21741 143 aaPredicted RBP14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 EFNA4P52798 201 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 RPL8P62917 257 aaKnown RBP14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 HAGHQ16775 308 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 SP5Q6BEB4 398 aaPredicted RBP14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 SSX7Q7RTT5 188 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 Q8N7P7 452 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 BEND2Q8NDZ0 799 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 OR5B3Q8NH48 314 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 RCC1LQ96I51 464 aaKnown RBP14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 RITA1Q96K30 269 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 INSIG2Q9Y5U4 225 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 FFAR4Q5NUL3 377 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 VSTM2AQ8TAG5 236 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 SIRT7Q9NRC8 400 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 WDR83OSQ9Y284 106 aa14.81□□□□□ -0.04
SEC61A2-213ENST00000475268 A0A1B0GW64 132 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 C17orf112F2Z3M2 114 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 EIF3GO75821 320 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 IGKV1D-33P01593 117 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 IGKV1-33P01594 117 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 IGLV2-23P01705 113 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 USF1P22415 310 aaPredicted RBP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 FGF8P55075 233 aaPredicted RBP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 MOB3BQ86TA1 216 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 RPP25LQ8N5L8 163 aaKnown RBP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 OR4P4Q8NGL7 312 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 GGACTQ9BVM4 153 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 TACC2O95359 2948 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 TRAV1-1A0A0B4J248 108 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 NUPL2O15504 423 aaKnown RBP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 PRB1P04280 392 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 ZNF787Q6DD87 383 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 OR10W1Q8NGF6 305 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 TMEM167AQ8TBQ9 72 aa14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 AMMECR1Q9Y4X0 333 aaPredicted RBP14.8□□□□□ -0.04
SEC61A2-213ENST00000475268 IGHV1-3A0A0C4DH29 117 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 SLC25A17O43808 307 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 DLK1P80370 383 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 TREML4Q6UXN2 200 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 OR4A5Q8NH83 315 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 MBD3L1Q8WWY6 194 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 RPEQ96AT9 228 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 TNCP24821 2201 aa14.79□□□□□ -0.04
SEC61A2-213ENST00000475268 SNAPINO95295 136 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 MBP02144 154 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 VMA21Q3ZAQ7 101 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 OR10G4Q8NGN3 311 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 OR10G9Q8NGN4 311 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 OR10G7Q8NGN6 311 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 CLDND2Q8NHS1 167 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 SLC35B3Q9H1N7 401 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 ZNF430Q9H8G1 570 aaPredicted RBP14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
SEC61A2-213ENST00000475268 OR13C7P0DN81 318 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms