RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZNF615Q8N8J6 731 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 NIPSNAP3BQ9BS92 247 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 TUBB1Q9H4B7 451 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 STARD5Q9NSY2 213 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 PTPRBP23467 1997 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FXYD6-FXYD2A0A087WZ82 144 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 C9orf118A6NHY6 69 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FSTP19883 344 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 MDKP21741 143 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 VDAC1P21796 283 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FOXI1Q12951 378 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 OR7A5Q15622 319 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 MSMO1Q15800 293 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 Q6ZN92 141 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 SLC25A48Q6ZT89 311 aaKnown RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 TOMM5Q8N4H5 51 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 C1QTNF5Q9BXJ0 243 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FXYD6Q9H0Q3 95 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 NRN1Q9NPD7 142 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 COA3Q9Y2R0 106 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 A0A1W2PS29 197 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 H3BMH7 237 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 J3KT08 172 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 C1orf105O95561 183 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 NTF3P20783 257 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 GCSHP23434 173 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 HSPE1P61604 102 aaKnown RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 DPTQ07507 201 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 GUSBP1Q15486 140 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 HBMQ6B0K9 141 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 TMEM14EPQ6UXP3 125 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FBXL14Q8N1E6 418 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 DEFB124Q8NES8 71 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 SLC37A2Q8TED4 501 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 AGMATQ9BSE5 352 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 RNF126Q9BV68 326 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 PLEKHA3Q9HB20 300 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 TRAV24A0A0B4J272 114 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 DUXBA0A1W2PPF3 345 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 UMAD1C9J7I0 102 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CREBL2O60519 120 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 MAOAP21397 527 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CNTFRP26992 372 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CEACAM16Q2WEN9 425 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 FAM166AQ6J272 317 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 LEG1Q6P5S2 330 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 SFTPA1Q8IWL2 248 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 DTWD1Q8N5C7 304 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 RBMXL3Q8N7X1 1067 aaKnown RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 TCEANCQ8N8B7 351 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 TEX45Q8NA69 505 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 MORN4Q8NDC4 146 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 OR52R1Q8NGF1 315 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 RNF128Q8TEB7 428 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 VAMP8Q9BV40 100 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 AIG1Q9NVV5 245 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 DUSP13Q9UII6 198 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 INSIG2Q9Y5U4 225 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ASXL3Q9C0F0 2248 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 KANTRA0A1W2PQU2 76 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 LINC01565O15544 149 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 GFRA3O60609 400 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 H3F3AP84243 136 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 EWSR1Q01844 656 aaKnown RBP eCLIP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 EBI3Q14213 229 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 SHISA6Q6ZSJ9 500 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 HOGA1Q86XE5 327 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 NFAM1Q8NET5 270 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 OR5D14Q8NGL3 314 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 OR1F12Q8NHA8 337 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 HSPB9Q9BQS6 159 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 MRPL32Q9BYC8 188 aaKnown RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 C6orf106Q9H6K1 298 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 A0A087WWL8 130 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 LCE2BO14633 110 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 SLC2A10O95528 541 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CD3EP07766 207 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 IL15RAQ13261 267 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 Q6Q795 121 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 PSMF1Q92530 271 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ZNF837Q96EG3 531 aaPredicted RBP4.01□□□□□ -1.77
NPHP3-206ENST00000474871 PRADC1Q9BSG0 188 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 SPRY4Q9C004 299 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ST6GALNAC2Q9UJ37 374 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 COL4A2P08572 1712 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ICE1Q9Y2F5 2266 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 EML5Q05BV3 1969 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 TRGV10A0A0A0MS01 117 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ZNF816-ZNF321PA0A0X1KG74 233 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 IGF1P05019 195 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CT45A8P0DMV1 189 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CT45A9P0DMV2 189 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 HLA-DRB5Q30154 266 aa4.01□□□□□ -1.77
NPHP3-206ENST00000474871 CT45A2Q5DJT8 189 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms