RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 VSTM2AQ8TAG5 236 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 STOML3Q8TAV4 291 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 WFDC12Q8WWY7 111 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 MS4A7Q9GZW8 240 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 MEGF9Q9H1U4 602 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 ARV1Q9H2C2 271 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 FKBP11Q9NYL4 201 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 PRNDQ9UKY0 176 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 LSM5Q9Y4Y9 91 aaKnown RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 YLPM1P49750 1951 aaKnown RBP5.31□□□□□ -1.56
ATG4A-207ENST00000474825 ABCA2Q9BZC7 2435 aa5.31□□□□□ -1.56
ATG4A-207ENST00000474825 ARHGAP32A7KAX9 2087 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 IGHV1-69DA0A0B4J2H0 117 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 A6NJY4 79 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 PMS2P5A8MQ11 134 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 TIMM23O14925 209 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 NPFFO15130 113 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 SHOXO15266 292 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 SCAF4O95104 1147 aaKnown RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 SCGB1D2O95969 90 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 IGHV1-69P01742 117 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 IGHV4-31P0DP07 118 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 CD99P14209 185 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 NUP62P37198 522 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 ATP5IP56385 69 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 EWSR1Q01844 656 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 PRB3Q04118 309 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 PSG5Q15238 335 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 AANATQ16613 207 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 TMEM249Q2WGJ8 235 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 BSXQ3C1V8 233 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 KLF17Q5JT82 389 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 PVRIGQ6DKI7 326 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 TEX261Q6UWH6 196 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 VKORC1L1Q8N0U8 176 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 DYNAPQ8N1N2 210 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 OR5B3Q8NH48 314 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 OR4A16Q8NH70 328 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 RNASE11Q8TAA1 199 aaKnown RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 RITA1Q96K30 269 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 HARBI1Q96MB7 349 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 CIB3Q96Q77 187 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 TSNAXQ99598 290 aaKnown RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 ARPC5LQ9BPX5 153 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 SLC25A31Q9H0C2 315 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 ARL6Q9H0F7 186 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 RBKSQ9H477 322 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 NDUFA4L2Q9NRX3 87 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 HIF1ANQ9NWT6 349 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 TCF19Q9Y242 345 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 AUP1Q9Y679 476 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 U3KQ87 197 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 MAP1AP78559 2803 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-207ENST00000474825 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
ATG4A-207ENST00000474825 ANKRD17O75179 2603 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 PRRC2AP48634 2157 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 CCDC168Q8NDH2 2452 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 TEX50A0A1B0GTY4 177 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 IGSF23A1L1A6 192 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 FAM24AA6NFZ4 105 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 CGB1A6NKQ9 187 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 H7C2Y5 167 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 KCNAB3O43448 404 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SSSCA1O60232 199 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 MOSP00540 346 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 CFDP00746 253 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 MAS1LP35410 378 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SAA4P35542 130 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 LGALS4P56470 323 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 RPS16P62249 146 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 RPL23AP62750 156 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 RPL8P62917 257 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SSBP2P81877 361 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 PRCDQ00LT1 54 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 PRSS8Q16651 343 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 VMA21Q3ZAQ7 101 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 ZNF767PQ75MW2 155 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SSX9Q7RTT3 188 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 MOB3BQ86TA1 216 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 UBAC2Q8NBM4 344 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 ZNF680Q8NEM1 530 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 OR8H1Q8NGG4 311 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 DTD1Q8TEA8 209 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 C17orf50Q8WW18 174 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 PHYHIPLQ96FC7 376 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 EAF1Q96JC9 268 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 Q96MF0 132 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SRSF8Q9BRL6 282 aaKnown RBP5.29□□□□□ -1.56
ATG4A-207ENST00000474825 MAGT1Q9H0U3 335 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 C7orf69Q9H7B7 122 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 SIGLEC9Q9Y336 463 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 F8P00451 2351 aa5.29□□□□□ -1.56
ATG4A-207ENST00000474825 IGHV3-72A0A0B4J1Y9 119 aa5.28□□□□□ -1.56
ATG4A-207ENST00000474825 A0A1B0GW64 132 aa5.28□□□□□ -1.56
ATG4A-207ENST00000474825 KANTRA0A1W2PQU2 76 aa5.28□□□□□ -1.56
ATG4A-207ENST00000474825 C15orf62A8K5M9 175 aa5.28□□□□□ -1.56
ATG4A-207ENST00000474825 PRSS46E5RG02 174 aa5.28□□□□□ -1.56
ATG4A-207ENST00000474825 WRBO00258 174 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms