RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 POC5Q8NA72 575 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 OR5AU1Q8NGC0 362 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 SRSF12Q8WXF0 261 aaKnown RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM56Q96MV1 263 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 KLK15Q9H2R5 256 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 PARP11Q9NR21 331 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 GAR1Q9NY12 217 aaKnown RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 NSG2Q9Y328 171 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 MSGN1A6NI15 193 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 G3V4G9 280 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 IGLV1-40P01703 118 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 IGHG4P01861 327 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 OPN1MWP04001 364 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 SERPINE2P07093 398 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 APELAP0DMC3 54 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 OPN1MW2P0DN77 364 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 OPN1MW3P0DN78 364 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 HLA-GP17693 338 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 S100GP29377 79 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
LIMD1-204ENST00000474665 GNB1P62873 340 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 RPL8P62917 257 aaKnown RBP5.45□□□□□ -1.54
LIMD1-204ENST00000474665 CBX3Q13185 183 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 DHRS2Q13268 280 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 PLGLAQ15195 96 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 BEAN1Q3B7T3 259 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 C19orf35Q6ZS72 473 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 C18orf65Q6ZTR6 163 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 LYZL2Q7Z4W2 148 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 SGPP2Q8IWX5 399 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 MMD2Q8IY49 270 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 CENPSQ8N2Z9 138 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 DUSP18Q8NEJ0 188 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 LFNGQ8NES3 379 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 GRPEL2Q8TAA5 225 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 MYOZ3Q8TDC0 251 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 CASTOR1Q8WTX7 329 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 ARPC1AQ92747 370 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 SCGB3A2Q96PL1 93 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 CITED2Q99967 270 aaPredicted RBP5.45□□□□□ -1.54
LIMD1-204ENST00000474665 C20orf85Q9H1P6 137 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM14BQ9NUH8 114 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 NUDT15Q9NV35 164 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 DMRT1Q9Y5R6 373 aa5.45□□□□□ -1.54
LIMD1-204ENST00000474665 TENM2Q9NT68 2774 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TRAV6A0A075B6T7 132 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TRAV41A0A0B4J266 112 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TEX50A0A1B0GTY4 177 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 IGLC7A0M8Q6 106 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 C9orf170A2RU37 121 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 PSMB11A5LHX3 300 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 HMX3A6NHT5 357 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 CENPXA8MT69 81 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 B3GALNT1O75752 331 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 SFT2D2O95562 160 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 RPLP1P05386 114 aaKnown RBP5.44□□□□□ -1.54
LIMD1-204ENST00000474665 FGF2P09038 288 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 OR4E1P0C645 316 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 AREGP15514 252 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 PSMB8P28062 276 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 RAB25P57735 213 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TNXAQ16473 311 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 ECSCRQ19T08 205 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TRIM16LQ309B1 348 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 AARDQ4LEZ3 155 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 AKIRIN2Q53H80 203 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 NMSQ5H8A3 153 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 CENPVQ7Z7K6 275 aaPredicted RBP5.44□□□□□ -1.54
LIMD1-204ENST00000474665 FOXRED2Q8IWF2 684 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 SLC35G3Q8N808 338 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 LRTM2Q8N967 370 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 DMBX1Q8NFW5 382 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 OR10W1Q8NGF6 305 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 OR52B4Q8NGK2 314 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 OR4A5Q8NH83 315 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 CHPT1Q8WUD6 406 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 RBPMSQ93062 196 aaKnown RBP5.44□□□□□ -1.54
LIMD1-204ENST00000474665 GPR146Q96CH1 333 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 TSC22D3Q99576 134 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 SEC22CQ9BRL7 303 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 ALX4Q9H161 411 aaPredicted RBP5.44□□□□□ -1.54
LIMD1-204ENST00000474665 NDUFA4L2Q9NRX3 87 aa5.44□□□□□ -1.54
LIMD1-204ENST00000474665 FAM240BA0A1B0GVZ2 78 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 C15orf61A6NNL5 157 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 M0QZ24 198 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 CNIH1O95406 144 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 H2AFB2P0C5Z0 115 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 VAMP1P23763 118 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 MAS1LP35410 378 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 RPL27AP46776 148 aaKnown RBP5.43□□□□□ -1.54
LIMD1-204ENST00000474665 MFAP2P55001 183 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 UBE2MP61081 183 aaKnown RBP5.43□□□□□ -1.54
LIMD1-204ENST00000474665 ERVK-16P61578 105 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 WT1-ASQ06250 92 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 FOXE3Q13461 319 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 KLK9Q2XQG4 91 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 ARSJQ5FYB0 599 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms