RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PEMTQ9UBM1 199 aa14.04□□□□□ -0.16
COL7A1-209ENST00000474432 GGCTO75223 188 aaKnown RBP14.03□□□□□ -0.16
COL7A1-209ENST00000474432 TNFAIP8O95379 198 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 PMP2P02689 132 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 NQO2P16083 231 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 NCS1P62166 190 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 CATR1Q13166 79 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 CD300EQ496F6 205 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-209ENST00000474432 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 SGPP2Q8IWX5 399 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 MUC7Q8TAX7 377 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 PLEKHA2Q9HB19 425 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 IFT46Q9NQC8 304 aa14.03□□□□□ -0.16
COL7A1-209ENST00000474432 DPPA5A6NC42 116 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 C2orf70A6NJV1 201 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 LGALS9O00182 355 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 PGLYRP1O75594 196 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-209ENST00000474432 DEFB114Q30KQ6 69 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 FAM209BQ5JX69 171 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 CLEC19AQ6UXS0 136 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 LINC00322Q6ZN03 302 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-209ENST00000474432 GPHB5Q86YW7 130 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 OR2K2Q8NGT1 345 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 GPX8Q8TED1 209 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 AIFM2Q9BRQ8 373 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 ZNF2Q9BSG1 426 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-209ENST00000474432 FUNDC2Q9BWH2 189 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 FXYD6Q9H0Q3 95 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 ZMAT4Q9H898 229 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 HRASLSQ9HDD0 168 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 TMEM140Q9NV12 185 aa14.02□□□□□ -0.17
COL7A1-209ENST00000474432 MFSD2BA6NFX1 497 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 FGF2P09038 288 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 FOLR2P14207 255 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 RPA2P15927 270 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 PRSS3P35030 304 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 HERV-K104P61576 105 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 HAGHQ16775 308 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 ZNF585BQ52M93 769 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 CASC10Q5T4H9 136 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 AADACL3Q5VUY0 350 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 OR10W1Q8NGF6 305 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 CITED4Q96RK1 184 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 ZC4H2Q9NQZ6 224 aa14.01□□□□□ -0.17
COL7A1-209ENST00000474432 RLN1P04808 185 aa14□□□□□ -0.17
COL7A1-209ENST00000474432 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
COL7A1-209ENST00000474432 VBP1P61758 197 aa14□□□□□ -0.17
COL7A1-209ENST00000474432 CD300LFQ8TDQ1 290 aa14□□□□□ -0.17
COL7A1-209ENST00000474432 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
COL7A1-209ENST00000474432 COMMD9Q9P000 198 aa14□□□□□ -0.17
COL7A1-209ENST00000474432 TENM2Q9NT68 2774 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 TEX50A0A1B0GTY4 177 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 TMEM213A2RRL7 107 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 CD7P09564 240 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 F2RP25116 425 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 ARL3P36405 182 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 TAS2R46P59540 309 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 OR5H2Q8NGV7 314 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 FCAMRQ8WWV6 532 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 CACNG8Q8WXS5 425 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 EEF1AKMT3Q96AZ1 226 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 SRSF8Q9BRL6 282 aaKnown RBP13.99□□□□□ -0.17
COL7A1-209ENST00000474432 COMMD3Q9UBI1 195 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 CSMD3Q7Z407 3707 aa13.99□□□□□ -0.17
COL7A1-209ENST00000474432 A8MWP6 167 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 DHFRP00374 187 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 APOA1P02647 267 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 ELK1P19419 428 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 CBLN1P23435 193 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 HLA-DMAP28067 261 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 HRH1P35367 487 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 LPAR6P43657 344 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 GTSCR1Q86UQ5 136 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 LAX1Q8IWV1 398 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 CADM3Q8N126 398 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 ZNF502Q8TBZ5 544 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 BORCS5Q969J3 196 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
COL7A1-209ENST00000474432 CMTM3Q96MX0 182 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 COMMD5Q9GZQ3 224 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
COL7A1-209ENST00000474432 SELENOKQ9Y6D0 94 aa13.98□□□□□ -0.17
COL7A1-209ENST00000474432 MARCH11A6NNE9 402 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 CLEC3BP05452 202 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 SMIM18P0DKX4 95 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 DEFA4P12838 97 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 MFAP2P55001 183 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 UNQ9165/PRO28630Q6UXU0 137 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 OR6F1Q8NGZ6 308 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 WDR89Q96FK6 387 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-209ENST00000474432 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 QTRT1Q9BXR0 403 aaKnown RBP13.97□□□□□ -0.17
COL7A1-209ENST00000474432 WFDC10AQ9H1F0 79 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 PLEKHA3Q9HB20 300 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 NDUFA4L2Q9NRX3 87 aa13.97□□□□□ -0.17
COL7A1-209ENST00000474432 STARD9Q9P2P6 4700 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 TRBV7-1A0A0A6YYK4 115 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms