RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 IFNA6P05013 189 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 FOLR2P14207 255 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 ARL3P36405 182 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 CD81P60033 236 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 DEFB114Q30KQ6 69 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 FAM106AQ4KMX7 169 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 TMEM17Q86X19 198 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 CXorf58Q96LI9 332 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 COMMD5Q9GZQ3 224 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 PLEKHA2Q9HB19 425 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 TRBV7-1A0A0A6YYK4 115 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 FCER2P06734 321 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 OR2B8PP59922 312 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 TMEM69Q5SWH9 247 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 AADACL3Q5VUY0 350 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 CLEC19AQ6UXS0 136 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 ADAMTSL5Q6ZMM2 481 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 ZNF818PQ6ZRF7 136 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 C19orf35Q6ZS72 473 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 DMBX1Q8NFW5 382 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 OR51H1Q8NH63 302 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 CCDC140Q96MF4 163 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 NEURL2Q9BR09 285 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 EHFQ9NZC4 300 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 COMMD9Q9P000 198 aa15.4■□□□□ 0.06
PDLIM4-206ENST00000474421 IGLV11-55A0A075B6I3 123 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 A0A087WXM4 84 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 MEIS3P1A6NDR6 274 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 UPK2O00526 184 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 CYB5BO43169 146 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 HLA-AP01891 365 aaKnown RBP15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 TAS2R46P59540 309 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 THOC7Q6I9Y2 204 aaKnown RBP15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 DHRS11Q6UWP2 260 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 EDA2RQ9HAV5 297 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 ZC4H2Q9NQZ6 224 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 THYN1Q9P016 225 aa15.39■□□□□ 0.05
PDLIM4-206ENST00000474421 ZNF785A8K8V0 405 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 IGHV3-23P01764 117 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 REG1AP05451 166 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 GNRHRP30968 328 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 RPS19P39019 145 aaKnown RBP15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 ERVK-16P61578 105 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 HSD17B13Q7Z5P4 300 aaPredicted RBP15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 SAMD12Q8N8I0 201 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 QTRT1Q9BXR0 403 aaKnown RBP15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 TMEM140Q9NV12 185 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 ANAPC10Q9UM13 185 aa15.38■□□□□ 0.05
PDLIM4-206ENST00000474421 ZNF320A2RRD8 509 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 CGB1A6NKQ9 187 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 MYOD1P15172 320 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 CBLN1P23435 193 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 TAS2R20P59543 309 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 GUCA2BQ16661 112 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 CMTM1Q8IZ96 169 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 TSPAN14Q8NG11 270 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 OR5H2Q8NGV7 314 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 MOB3AQ96BX8 217 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 YIPF6Q96EC8 236 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 ZNF2Q9BSG1 426 aaPredicted RBP15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 PLEKHA3Q9HB20 300 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 CEPT1Q9Y6K0 416 aa15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 DYNC2H1Q8NCM8 4307 aaKnown RBP15.37■□□□□ 0.05
PDLIM4-206ENST00000474421 IGLC7A0M8Q6 106 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 A8MWP6 167 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 S1PR2O95136 353 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 TNFAIP8O95379 198 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 CLEC3BP05452 202 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 NAT1P18440 290 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 PRSS3P35030 304 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 TGFBR1P36897 503 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 RFX2P48378 723 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 S4R3C0 116 aa15.36■□□□□ 0.05
PDLIM4-206ENST00000474421 TRAV3A0A0B4J244 114 aa15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 PMP2P02689 132 aa15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 F2RP25116 425 aa15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 LSM3P62310 102 aaKnown RBP15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 ZNF57Q68EA5 555 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 LINC00322Q6ZN03 302 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 SLC16A13Q7RTY0 426 aa15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 CADM3Q8N126 398 aa15.35■□□□□ 0.05
PDLIM4-206ENST00000474421 TMEM213A2RRL7 107 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 MFSD2BA6NFX1 497 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 MARCH11A6NNE9 402 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 OR11H12B2RN74 326 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 PGLYRP1O75594 196 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 RLN1P04808 185 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 CD7P09564 240 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 TRAPPC2P0DI81 140 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 TRAPPC2BP0DI82 140 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 PTBP1P26599 531 aaKnown RBP eCLIP15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 OR1L8Q8NGR8 309 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 OR6F1Q8NGZ6 308 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 MARC2Q969Z3 335 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 SLC25A46Q96AG3 418 aa15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 DGCR14Q96DF8 476 aaKnown RBP15.34■□□□□ 0.05
PDLIM4-206ENST00000474421 SMIM31A0A1B0GVY4 71 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 GPR31O00270 319 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 S100GP29377 79 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 ANKRD55Q3KP44 614 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms