RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 OR5D16Q8NGK9 328 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 OR6N1Q8NGY5 312 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 EEF1AKMT1Q8WVE0 214 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 TNFAIP8L1Q8WVP5 186 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 PACRGQ96M98 296 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF75AQ96N20 296 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 PDCD1LG2Q9BQ51 273 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 ATG5Q9H1Y0 275 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 SMDT1Q9H4I9 107 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 PRORYQ9H606 182 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 TVP23BQ9NYZ1 205 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 OR52A1Q9UKL2 312 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 SIGLEC7Q9Y286 467 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 PUS1Q9Y606 427 aaKnown RBP eCLIP2.74□□□□□ -1.97
BRCA1-212ENST00000473961 YLPM1P49750 1951 aaKnown RBP2.74□□□□□ -1.97
BRCA1-212ENST00000473961 ALPK3Q96L96 1907 aa2.74□□□□□ -1.97
BRCA1-212ENST00000473961 BTAF1O14981 1849 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SIP14410 1827 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 PHIPQ8WWQ0 1821 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TRIP11Q15643 1979 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 A0A087WWC5 75 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TRAV8-6A0A0B4J262 113 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 A0A1B0GTI1 187 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 A0A1B0GW15 77 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TVP23AA6NH52 213 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 A6NIN4 97 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 FAM183AA6NL82 134 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 M0R036 132 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SOCS1O15524 211 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 RBFOX2O43251 390 aaKnown RBP eCLIP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SNAI2O43623 268 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BKO60814 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ARL6IP5O75915 188 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 CST4P01036 141 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TRBV12-3P01733 135 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 IFNA6P05013 189 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BJP06899 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SOD3P08294 240 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 CST2P09228 141 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 UCHL1P09936 223 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 GIMD1P0DJR0 217 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 FABP4P15090 132 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BOP23527 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 PSMB6P28072 239 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BBP33778 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 IFNGR2P38484 337 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TTPAP49638 278 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 CLDN12P56749 244 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 OR12D2P58182 307 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BDP58876 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BCP62807 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 RANP62826 216 aaKnown RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SSBP1Q04837 148 aaKnown RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ADIGQ0VDE8 80 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 GUK1Q16774 197 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST2H2BEQ16778 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 GOLGA7BQ2TAP0 167 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 LINC00303Q3SY05 128 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 COL5A1-AS1Q5SY13 56 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 C1orf194Q5T5A4 169 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 OR2T2Q6IF00 324 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 Q6ZR03 302 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TRAPPC5Q8IUR0 188 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 LGI3Q8N145 548 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 C17orf78Q8N4C9 275 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 KRTCAP2Q8N6L1 136 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 LRRC52Q8N7C0 313 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 CYB561A3Q8NBI2 242 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ORAOV1Q8WV07 137 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BHQ93079 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 PPCDCQ96CD2 204 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 MUCL1Q96DR8 90 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 CPNE2Q96FN4 548 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 S100A16Q96FQ6 103 aaKnown RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF414Q96IQ9 312 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF514Q96K75 400 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 KCNS1Q96KK3 526 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 FAM19A4Q96LR4 140 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TRIB3Q96RU7 358 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BNQ99877 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BMQ99879 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 HIST1H2BLQ99880 126 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 GABRG3Q99928 467 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SLC25A21Q9BQT8 299 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-212ENST00000473961 TIMM29Q9BSF4 260 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 POTEKPQ9BYX7 375 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 OR8D2Q9GZM6 311 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 SLC25A31Q9H0C2 315 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 PARP11Q9NR21 331 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 VAX2Q9UIW0 290 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 PSG11Q9UQ72 335 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 STRCP1A6NGW2 1772 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 A0A0G2JMZ2 1700 aa2.73□□□□□ -1.97
BRCA1-212ENST00000473961 LRRC37A2A6NM11 1700 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms