RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TRIM16LQ309B1 348 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 ADAD2Q8NCV1 583 aaKnown RBP16.24■□□□□ 0.19
TOP3A-204ENST00000472959 OR4F17Q8NGA8 305 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 OR4F4Q96R69 305 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 COMMD5Q9GZQ3 224 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 TRAV3A0A0B4J244 114 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 A0A1W2PRX2 142 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 H3BUA1 57 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 OR5AC1P0C628 307 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 RAB9AP51151 201 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 C10orf55Q5SWW7 151 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 ASPHD1Q5U4P2 390 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 H2BFWTQ7Z2G1 175 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 MYOZ3Q8TDC0 251 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 GLYATL2Q8WU03 294 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 TMEM230Q96A57 120 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 GALNT14Q96FL9 552 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 KLK15Q9H2R5 256 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 FKBP11Q9NYL4 201 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 PRNDQ9UKY0 176 aa16.23■□□□□ 0.19
TOP3A-204ENST00000472959 BRI3O95415 125 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 CDS2O95674 445 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 AKR1C4P17516 323 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 CDX1P47902 265 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-204ENST00000472959 CCR6P51684 374 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 LCNL1Q6ZST4 164 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 OR5T1Q8NG75 326 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 SLA2Q9H6Q3 261 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 TET2Q6N021 2002 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-204ENST00000472959 TNCP24821 2201 aa16.22■□□□□ 0.19
TOP3A-204ENST00000472959 PLA2G10O15496 165 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 NDUFB6O95139 128 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 TSPAN15O95858 294 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 OR2B8PP59922 312 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 TMEM128Q5BJH2 165 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 TMED4Q7Z7H5 227 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 SLC25A42Q86VD7 318 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 ZNF695Q8IW36 515 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 FAM110DQ8TAY7 271 aaPredicted RBP16.21■□□□□ 0.19
TOP3A-204ENST00000472959 UBE2E2Q96LR5 201 aa16.21■□□□□ 0.19
TOP3A-204ENST00000472959 FYTTD1Q96QD9 318 aaKnown RBP16.21■□□□□ 0.19
TOP3A-204ENST00000472959 SRSF8Q9BRL6 282 aaKnown RBP16.21■□□□□ 0.19
TOP3A-204ENST00000472959 NUDT19A8MXV4 375 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 TEX22C9J3V5 150 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 LYRM1O43325 122 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 OR9G9P0C7N8 305 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 ANXA3P12429 323 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 AKR1C2P52895 323 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 KIAA0141Q14154 515 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-204ENST00000472959 THOC7Q6I9Y2 204 aaKnown RBP16.2■□□□□ 0.18
TOP3A-204ENST00000472959 TTC9CQ8N5M4 171 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 OR1L8Q8NGR8 309 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 RBPMSQ93062 196 aaKnown RBP16.2■□□□□ 0.18
TOP3A-204ENST00000472959 RRNAD1Q96FB5 475 aaKnown RBP16.2■□□□□ 0.18
TOP3A-204ENST00000472959 TMEM56Q96MV1 263 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 ZNF355PQ9NSJ1 428 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 TMEM56-RWDD3S4R434 201 aa16.2■□□□□ 0.18
TOP3A-204ENST00000472959 PIGBOS1A0A0B4J2F0 54 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 E7EUB6 86 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 IGKV1-5P01602 117 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 APELAP0DMC3 54 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 BTCP35070 178 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 SUPT4H1P63272 117 aaKnown RBP16.19■□□□□ 0.18
TOP3A-204ENST00000472959 TREML4Q6UXN2 200 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 CENPSQ8N2Z9 138 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 ZNF491Q8N8L2 437 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 KLHL30-AS1Q8NEE0 82 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 OR5B3Q8NH48 314 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 OR4A16Q8NH70 328 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 IL22RA2Q969J5 263 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 QTRT1Q9BXR0 403 aaKnown RBP16.19■□□□□ 0.18
TOP3A-204ENST00000472959 TMEM14BQ9NUH8 114 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 COA4Q9NYJ1 87 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 OR51B2Q9Y5P1 312 aa16.19■□□□□ 0.18
TOP3A-204ENST00000472959 TEX50A0A1B0GTY4 177 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 A0A1B0GW64 132 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 HMX3A6NHT5 357 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 C15orf61A6NNL5 157 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 NPIPB5A8MRT5 1133 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 TRGV3P03979 118 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 P0C879 139 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 TRAPPC2P0DI81 140 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 TRAPPC2BP0DI82 140 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 MYOD1P15172 320 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 UBE2MP61081 183 aaKnown RBP16.18■□□□□ 0.18
TOP3A-204ENST00000472959 SRPXP78539 464 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 TMEM187Q14656 261 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 HSD17B13Q7Z5P4 300 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-204ENST00000472959 FAM219AQ8IW50 185 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 SELENOHQ8IZQ5 122 aaKnown RBP16.18■□□□□ 0.18
TOP3A-204ENST00000472959 C4orf3Q8WVX3 66 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 MS4A10Q96PG2 267 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 ZNF257Q9Y2Q1 563 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 NSG2Q9Y328 171 aa16.18■□□□□ 0.18
TOP3A-204ENST00000472959 CGB1A6NKQ9 187 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 UPK1BO75841 260 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 TPPP2P59282 170 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 C18orf65Q6ZTR6 163 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 RNASE11Q8TAA1 199 aaKnown RBP16.17■□□□□ 0.18
TOP3A-204ENST00000472959 LHFPL5Q8TAF8 219 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms