RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 S100A16Q96FQ6 103 aaKnown RBP11.56□□□□□ -0.56
VTI1A-203ENST00000472892 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 C2orf70A6NJV1 201 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 HLA-AP01891 365 aaKnown RBP11.55□□□□□ -0.56
VTI1A-203ENST00000472892 FCER2P06734 321 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 MYOD1P15172 320 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
VTI1A-203ENST00000472892 CATR1Q13166 79 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 DHRS11Q6UWP2 260 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 ZNF818PQ6ZRF7 136 aa11.55□□□□□ -0.56
VTI1A-203ENST00000472892 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
VTI1A-203ENST00000472892 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 UPK2O00526 184 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 FGF2P09038 288 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 NQO2P16083 231 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 EDN2P20800 178 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 GNRHRP30968 328 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 TGFBR1P36897 503 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 RPS19P39019 145 aaKnown RBP11.54□□□□□ -0.56
VTI1A-203ENST00000472892 FXYD4P59646 89 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 OR2B8PP59922 312 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 CD81P60033 236 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 CLEC19AQ6UXS0 136 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 CD300LFQ8TDQ1 290 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 HRASLSQ9HDD0 168 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 ZC4H2Q9NQZ6 224 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
VTI1A-203ENST00000472892 RYR2Q92736 4967 aa11.54□□□□□ -0.56
VTI1A-203ENST00000472892 TRAV3A0A0B4J244 114 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 MEIS3P1A6NDR6 274 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 REG1AP05451 166 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 DEFA4P12838 97 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 CBLN1P23435 193 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 ARL3P36405 182 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 UBE2NLQ5JXB2 153 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 DYNLRB2Q8TF09 96 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 BORCS5Q969J3 196 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 EEF1AKMT3Q96AZ1 226 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 YIPF6Q96EC8 236 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 SRSF8Q9BRL6 282 aaKnown RBP11.53□□□□□ -0.56
VTI1A-203ENST00000472892 PALMDQ9NP74 551 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 SLC2A8Q9NY64 477 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 ANAPC10Q9UM13 185 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 S4R3C0 116 aa11.53□□□□□ -0.56
VTI1A-203ENST00000472892 TRBV7-1A0A0A6YYK4 115 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 TPPPO94811 219 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 IFNA6P05013 189 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 CLEC3BP05452 202 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 CD7P09564 240 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 NAT1P18440 290 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 RFX2P48378 723 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 AADACL3Q5VUY0 350 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 TMEM17Q86X19 198 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 CXorf58Q96LI9 332 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 PLEKHA3Q9HB20 300 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 IFT46Q9NQC8 304 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 TMEM140Q9NV12 185 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 EHFQ9NZC4 300 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 TENM2Q9NT68 2774 aa11.52□□□□□ -0.57
VTI1A-203ENST00000472892 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 A8MWP6 167 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-203ENST00000472892 HERV-K104P61576 105 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 SAMD12Q8N8I0 201 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 DMBX1Q8NFW5 382 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 WDR89Q96FK6 387 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF2Q9BSG1 426 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-203ENST00000472892 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 COMMD9Q9P000 198 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 CEPT1Q9Y6K0 416 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
VTI1A-203ENST00000472892 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 TMEM213A2RRL7 107 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 S1PR2O95136 353 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 PMP2P02689 132 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 PTBP1P26599 531 aaKnown RBP eCLIP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 TAS2R20P59543 309 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 GUCA2BQ16661 112 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 TMEM69Q5SWH9 247 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 ZFAND6Q6FIF0 208 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 CADM3Q8N126 398 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 TSPAN14Q8NG11 270 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF502Q8TBZ5 544 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms