RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 UPK2O00526 184 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 NOL3O60936 208 aaKnown RBP14.9□□□□□ -0.02
COMMD1-208ENST00000472729 S1PR2O95136 353 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 RPA2P15927 270 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 PSMB6P28072 239 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 THYN1Q9P016 225 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 EXTL2Q9UBQ6 330 aa14.9□□□□□ -0.02
COMMD1-208ENST00000472729 MARCH11A6NNE9 402 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 KRASP01116 189 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 TRBV12-3P01733 135 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 AREGP15514 252 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 LPAR6P43657 344 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 ZNF45Q02386 682 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 PHLDA2Q53GA4 152 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 RNASE12Q5GAN4 147 aaKnown RBP14.89□□□□□ -0.03
COMMD1-208ENST00000472729 FCAMRQ8WWV6 532 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 EEF1AKMT3Q96AZ1 226 aa14.89□□□□□ -0.03
COMMD1-208ENST00000472729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 GGCTO75223 188 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 REG1AP05451 166 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 CRYGCP07315 174 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 OR2B8PP59922 312 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 POU2AF1Q16633 256 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 RNASE10Q5GAN6 216 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 THOC7Q6I9Y2 204 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 LCN12Q6JVE5 192 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 C11orf87Q6NUJ2 197 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 HSD17B13Q7Z5P4 300 aaPredicted RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 SLC38A6Q8IZM9 456 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 CXorf58Q96LI9 332 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 ASCL2Q99929 193 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 SRSF8Q9BRL6 282 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 HINT2Q9BX68 163 aa14.88□□□□□ -0.03
COMMD1-208ENST00000472729 QTRT1Q9BXR0 403 aaKnown RBP14.88□□□□□ -0.03
COMMD1-208ENST00000472729 IGLV1-51P01701 117 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 FGF2P09038 288 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 TRAPPC2P0DI81 140 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 TRAPPC2BP0DI82 140 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 PGAM2P15259 253 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 GTSCR1Q86UQ5 136 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 HAPLN4Q86UW8 402 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 TSC22D3Q99576 134 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 FXYD6Q9H0Q3 95 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 FKBP11Q9NYL4 201 aa14.87□□□□□ -0.03
COMMD1-208ENST00000472729 E7EUB6 86 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 RBMXL2O75526 392 aaKnown RBP14.86□□□□□ -0.03
COMMD1-208ENST00000472729 TPPPO94811 219 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 SERPINE2P07093 398 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 MYOD1P15172 320 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 CTRB1P17538 263 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 ARL3P36405 182 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 CTRB2Q6GPI1 263 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 CLVS1Q8IUQ0 354 aaPredicted RBP14.86□□□□□ -0.03
COMMD1-208ENST00000472729 SGPP2Q8IWX5 399 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 DYNLRB2Q8TF09 96 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 PRNDQ9UKY0 176 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 U3KQK5 164 aa14.86□□□□□ -0.03
COMMD1-208ENST00000472729 TRBV7-1A0A0A6YYK4 115 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 TRAV3A0A0B4J244 114 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 M0QYG6 137 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 BMPR1BO00238 502 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 IGHV3-23P01764 117 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 TBPP20226 339 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 G6PCP35575 357 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 MECP2P51608 486 aaKnown RBP14.85□□□□□ -0.03
COMMD1-208ENST00000472729 FAM106AQ4KMX7 169 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 CLEC19AQ6UXS0 136 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 TBC1D26Q86UD7 250 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 Q8N402 240 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 OR1L8Q8NGR8 309 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 RAB2BQ8WUD1 216 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 SIGLEC8Q9NYZ4 499 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 KLK11Q9UBX7 282 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 OR51B2Q9Y5P1 312 aa14.85□□□□□ -0.03
COMMD1-208ENST00000472729 ZNF320A2RRD8 509 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 PPP5D1E7EU14 171 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 NDUFB8O95169 186 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 OR13C7P0DN81 318 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 ALDH3B2P48448 385 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 UCP3P55916 312 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 C19orf35Q6ZS72 473 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 TMEM56Q96MV1 263 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 WWC2-AS2Q96NR7 200 aa14.84□□□□□ -0.03
COMMD1-208ENST00000472729 TEX50A0A1B0GTY4 177 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 OR2C1O95371 312 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 CSN3P07498 182 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 H2BFWTQ7Z2G1 175 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 ARRDC1Q8N5I2 433 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 OR52I2Q8NH67 350 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 OR4A16Q8NH70 328 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 LSM10Q969L4 123 aaKnown RBP14.83□□□□□ -0.04
COMMD1-208ENST00000472729 FANCD2OSQ96PS1 177 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 ZMAT4Q9H898 229 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 FAM212BQ9NTI7 297 aaPredicted RBP14.83□□□□□ -0.04
COMMD1-208ENST00000472729 S4R3C0 116 aa14.83□□□□□ -0.04
COMMD1-208ENST00000472729 DNAH3Q8TD57 4116 aa14.82□□□□□ -0.04
COMMD1-208ENST00000472729 A0A1B0GW64 132 aa14.82□□□□□ -0.04
COMMD1-208ENST00000472729 ATG12O94817 140 aa14.82□□□□□ -0.04
COMMD1-208ENST00000472729 HLA-AP01891 365 aaKnown RBP14.82□□□□□ -0.04
COMMD1-208ENST00000472729 CD3DP04234 171 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms