RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SMCO1Q147U7 214 aa8.37□□□□□ -1.07
UBE2F-220ENST00000472479 POU2AF1Q16633 256 aa8.37□□□□□ -1.07
UBE2F-220ENST00000472479 IAH1Q2TAA2 248 aaPredicted RBP8.37□□□□□ -1.07
UBE2F-220ENST00000472479 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
UBE2F-220ENST00000472479 PUSL1Q8N0Z8 303 aaKnown RBP8.37□□□□□ -1.07
UBE2F-220ENST00000472479 OR1L8Q8NGR8 309 aa8.37□□□□□ -1.07
UBE2F-220ENST00000472479 QTRT1Q9BXR0 403 aaKnown RBP8.37□□□□□ -1.07
UBE2F-220ENST00000472479 A0A0G2JRQ6 117 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 A0A1B0GU03 582 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 CEBPZOSA8MTT3 80 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 HLA-DRB1P01911 266 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 TRAPPC2P0DI81 140 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 TRAPPC2BP0DI82 140 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 APELAP0DMC3 54 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
UBE2F-220ENST00000472479 ZNF562Q6V9R5 426 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 FAM71E2Q8N5Q1 922 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 ARPC1AQ92747 370 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 FAM103A1Q9BTL3 118 aaKnown RBP8.36□□□□□ -1.07
UBE2F-220ENST00000472479 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 CACFD1Q9UGQ2 172 aa8.36□□□□□ -1.07
UBE2F-220ENST00000472479 MTORP42345 2549 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 TEX50A0A1B0GTY4 177 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 C15orf61A6NNL5 157 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 ST8SIA3O43173 380 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 SIX6O95475 246 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 CRYGBP07316 175 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 FGF2P09038 288 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 MYOD1P15172 320 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
UBE2F-220ENST00000472479 RPL15P61313 204 aaKnown RBP8.35□□□□□ -1.07
UBE2F-220ENST00000472479 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
UBE2F-220ENST00000472479 RELBQ01201 579 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 ECSCRQ19T08 205 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 UNQ5815/PRO19632Q6UWF5 114 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 CENPVQ7Z7K6 275 aaPredicted RBP8.35□□□□□ -1.07
UBE2F-220ENST00000472479 PLEKHA3Q9HB20 300 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 LINC00527Q9UJ94 153 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 WSB1Q9Y6I7 421 aa8.35□□□□□ -1.07
UBE2F-220ENST00000472479 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 A0A0B4J293 547 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 AP4M1O00189 453 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 MED6O75586 246 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 AMY1AP04745 511 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 DEFA4P12838 97 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 NKX2-1P43699 371 aaPredicted RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 COMPP49747 757 aaPredicted RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 S100A10P60903 97 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 RRAS2P62070 204 aaPredicted RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 ERHP84090 104 aaKnown RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 CYCSP99999 105 aaKnown RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 FCN2Q15485 313 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 C10orf55Q5SWW7 151 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 Q6ZNX1 250 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 Q6ZRM9 215 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 LFNGQ8NES3 379 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 SRSF12Q8WXF0 261 aaKnown RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 C2orf50Q96LR7 162 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 HSPB9Q9BQS6 159 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 HIPK2Q9H2X6 1198 aa8.34□□□□□ -1.07
UBE2F-220ENST00000472479 HEYLQ9NQ87 328 aaPredicted RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 PAIP2BQ9ULR5 123 aaKnown RBP8.34□□□□□ -1.07
UBE2F-220ENST00000472479 FN1P02751 2386 aaKnown RBP8.33□□□□□ -1.08
UBE2F-220ENST00000472479 A0A1W2PN81 502 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 HMX3A6NHT5 357 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 MPTX1A8MV57 137 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 L7N2F9 121 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 CYB5BO43169 146 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 IGHG2P01859 326 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 RLN2P04090 185 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 SLC25A6P12236 298 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 CHRNA7P36544 502 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 SNCAP37840 140 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 SPCS3P61009 180 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 VAMP2P63027 116 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 SLC35B1P78383 322 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 C2orf68Q2NKX9 166 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 Q6ZS46 218 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 CADM3Q8N126 398 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 OR5T1Q8NG75 326 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 OR5M8Q8NGP6 311 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 TAF15Q92804 592 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBE2F-220ENST00000472479 OR10C1Q96KK4 312 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 MAGT1Q9H0U3 335 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 FOXA2Q9Y261 457 aaPredicted RBP8.33□□□□□ -1.08
UBE2F-220ENST00000472479 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
UBE2F-220ENST00000472479 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
UBE2F-220ENST00000472479 SVEP1Q4LDE5 3571 aa8.33□□□□□ -1.08
UBE2F-220ENST00000472479 TRAV41A0A0B4J266 112 aa8.32□□□□□ -1.08
UBE2F-220ENST00000472479 LINC01548A6NM66 108 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms