RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 IGLV11-55A0A075B6I3 123 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 IGHV3OR16-13A0A075B7E8 117 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 IGHV3-74A0A0B4J1X5 117 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 OR2T8A6NH00 312 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 ODF3L2Q3SX64 289 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 PLET1Q6UQ28 207 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 PUSL1Q8N0Z8 303 aaKnown RBP7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 UBAC2Q8NBM4 344 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 RAB26Q9ULW5 256 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 MRPS7Q9Y2R9 242 aaKnown RBP7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 OR2W1Q9Y3N9 320 aa7.47□□□□□ -1.21
SCAMP3-205ENST00000472397 TMEM235A6NFC5 223 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 SULT1C2O00338 296 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 RGS10O43665 173 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 CREBL2O60519 120 aaPredicted RBP7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 HLA-DQB1P01920 261 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 CTSDP07339 412 aaPredicted RBP7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 HLA-GP17693 338 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 BMI1P35226 326 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 APOC4P55056 127 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 SSX1Q16384 188 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 ANKRD55Q3KP44 614 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 OR4A47Q6IF82 309 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 SLC25A24Q6NUK1 477 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 NR2C2APQ86WQ0 139 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 WFDC3Q8IUB2 231 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 SLC38A6Q8IZM9 456 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 GBGT1Q8N5D6 347 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 STPG3Q8N7X2 389 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 ZNF502Q8TBZ5 544 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 SECTM1Q8WVN6 248 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 RNF183Q96D59 192 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 MGLLQ99685 303 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 HINT2Q9BX68 163 aa7.46□□□□□ -1.22
SCAMP3-205ENST00000472397 IFITM5A6NNB3 132 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 A8MWP6 167 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 XRCC3O43542 346 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 SSX5O60225 188 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 IGHV3-48P01763 117 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 CRYGCP07315 174 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 CD36P16671 472 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 FXYD4P59646 89 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 OR2B8PP59922 312 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 RPL8P62917 257 aaKnown RBP7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 EIF4EBP1Q13541 118 aaPredicted RBP7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 C22orf42Q6IC83 251 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 SPAG16Q8N0X2 631 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 GVQW1Q8N7I0 195 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 CHRDL1Q9BU40 450 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 MRPL27Q9P0M9 148 aaKnown RBP7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 NSG2Q9Y328 171 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 UFC1Q9Y3C8 167 aa7.45□□□□□ -1.22
SCAMP3-205ENST00000472397 IGLC7A0M8Q6 106 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 MEIS3P1A6NDR6 274 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 PDCD5O14737 125 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 TGOLN2O43493 480 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 C8orf88P0DMB2 117 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 RAB3BP20337 219 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 MYL9P24844 172 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 FCGR2CP31995 323 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 GNG2P59768 71 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 MLLT11Q13015 90 aaPredicted RBP7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 TRAM1Q15629 374 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 TIMM50Q3ZCQ8 353 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 ZNF773Q6PK81 442 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 Q6ZWC4 215 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 OR51H1Q8NH63 302 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 CD300LFQ8TDQ1 290 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 MAP6D1Q9H9H5 199 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 TPRKBQ9Y3C4 175 aa7.44□□□□□ -1.22
SCAMP3-205ENST00000472397 TRBV7-1A0A0A6YYK4 115 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 IGHV3-66A0A0C4DH42 116 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 METTL21EPA6NDL7 271 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 UPK2O00526 184 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 DHFRP00374 187 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 HRASP01112 189 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 OR13C7P0DN81 318 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 HIST1H1BP16401 226 aaKnown RBP7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 RAB6AP20340 208 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 MFAP2P55001 183 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 Q56UQ5 140 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 HACD4Q5VWC8 232 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 C11orf45Q8TAV5 145 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 CXorf58Q96LI9 332 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 RNF2Q99496 336 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 HSD17B10Q99714 261 aaKnown RBP7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 SPAG8Q99932 426 aaPredicted RBP7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 RARRES2Q99969 163 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 ZNF436Q9C0F3 470 aaPredicted RBP7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 DUSP21Q9H596 190 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 C5orf66Q9H5L9 145 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 ACOT13Q9NPJ3 140 aa7.43□□□□□ -1.22
SCAMP3-205ENST00000472397 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
SCAMP3-205ENST00000472397 IGLL5B9A064 214 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms