RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 NUDT19A8MXV4 375 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 BRI3O95415 125 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
SNX13-205ENST00000471744 G6PCP35575 357 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
SNX13-205ENST00000471744 RAB9AP51151 201 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 DHODHQ02127 395 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
SNX13-205ENST00000471744 TRIM16LQ309B1 348 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 TP53RKQ96S44 253 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
SNX13-205ENST00000471744 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 PRNDQ9UKY0 176 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 VSIG4Q9Y279 399 aa11.81□□□□□ -0.52
SNX13-205ENST00000471744 TSPAN15O95858 294 aa11.8□□□□□ -0.52
SNX13-205ENST00000471744 TREML4Q6UXN2 200 aa11.8□□□□□ -0.52
SNX13-205ENST00000471744 ZNF695Q8IW36 515 aa11.8□□□□□ -0.52
SNX13-205ENST00000471744 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
SNX13-205ENST00000471744 GALNT14Q96FL9 552 aa11.8□□□□□ -0.52
SNX13-205ENST00000471744 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
SNX13-205ENST00000471744 NOTCH3Q9UM47 2321 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 SOX15O60248 233 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 ANXA3P12429 323 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 AKR1C2P52895 323 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 ZNF846Q147U1 533 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 HIST2H2BDQ6DRA6 164 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 HSD17B13Q7Z5P4 300 aaPredicted RBP11.79□□□□□ -0.52
SNX13-205ENST00000471744 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 FYTTD1Q96QD9 318 aaKnown RBP11.79□□□□□ -0.52
SNX13-205ENST00000471744 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
SNX13-205ENST00000471744 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 CDS2O95674 445 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 DHFRP00374 187 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 PF4P02776 101 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 AKR1C4P17516 323 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 TPPP2P59282 170 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 SRPXP78539 464 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 SP6Q3SY56 376 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 TMEM128Q5BJH2 165 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 ADAD2Q8NCV1 583 aaKnown RBP11.78□□□□□ -0.52
SNX13-205ENST00000471744 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
SNX13-205ENST00000471744 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
SNX13-205ENST00000471744 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
SNX13-205ENST00000471744 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 ZNF257Q9Y2Q1 563 aa11.78□□□□□ -0.52
SNX13-205ENST00000471744 A0A0G2JLM5 398 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 NPIPB5A8MRT5 1133 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 NDUFB6O95139 128 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 TRGV3P03979 118 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 UBE2MP61081 183 aaKnown RBP11.77□□□□□ -0.53
SNX13-205ENST00000471744 RUNX1Q01196 453 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
SNX13-205ENST00000471744 CENPSQ8N2Z9 138 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
SNX13-205ENST00000471744 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
SNX13-205ENST00000471744 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 LYRM1O43325 122 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 RBMXL2O75526 392 aaKnown RBP11.76□□□□□ -0.53
SNX13-205ENST00000471744 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 APELAP0DMC3 54 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 MYCNOSP40205 109 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 CCR6P51684 374 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
SNX13-205ENST00000471744 TMEM187Q14656 261 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 USMG5Q96IX5 58 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
SNX13-205ENST00000471744 TMEM56-RWDD3S4R434 201 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms