RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SAMD4BQ5PRF9 694 aaKnown RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 IBA57Q5T440 356 aaKnown RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 DEGS2Q6QHC5 323 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 GLDNQ6ZMI3 551 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 MSRB3Q8IXL7 192 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 SAXO1Q8IYX7 474 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 C1orf158Q8N1D5 194 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 DRAXINQ8NBI3 349 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 OTOSQ8NHW6 89 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 PP6455Q8WZ26 134 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 SPSB1Q96BD6 273 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 OTULINQ96BN8 352 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 TLCD1Q96CP7 247 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 BSCL2Q96G97 398 aaPredicted RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 NARS2Q96I59 477 aaKnown RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 NRN1Q9NPD7 142 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 NUFIP1Q9UHK0 495 aaKnown RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 FAM32AQ9Y421 112 aaKnown RBP2.35□□□□□ -2.03
LRCH3-213ENST00000471667 LRRC42Q9Y546 428 aa2.35□□□□□ -2.03
LRCH3-213ENST00000471667 IGKV1-27A0A075B6S5 117 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 TRAV24A0A0B4J272 114 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 A0A1W2PS18 150 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 RIIAD1A6NNX1 92 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 NPIPB5A8MRT5 1133 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 ISLRO14498 428 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 YPEL1O60688 119 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 OR7C1O76099 320 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-213ENST00000471667 ZNF682O95780 498 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 HBZP02008 142 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 ZNF688P0C7X2 276 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 CT45A6P0DMU7 189 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 CT45A5P0DMU8 189 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 CT45A7P0DMV0 189 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 PSKH1P11801 424 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 SPI1P17947 270 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 CALRP27797 417 aaKnown RBP2.34□□□□□ -2.03
LRCH3-213ENST00000471667 B2MP61769 119 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 UNC119Q13432 240 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 TPBGQ13641 420 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 UBE2V2Q15819 145 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 RTL8BQ17RB0 113 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 LRRC23Q53EV4 343 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-213ENST00000471667 SYT6Q5T7P8 510 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-213ENST00000471667 DGAT2L7PQ6IED9 249 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 TBPL2Q6SJ96 375 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 MMD2Q8IY49 270 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 STXBP6Q8NFX7 210 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 PLPPR1Q8TBJ4 325 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 C7orf33Q8WU49 177 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 SECTM1Q8WVN6 248 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 TMEM18Q96B42 140 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 GALMQ96C23 342 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 PELI1Q96FA3 418 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 OPALINQ96PE5 141 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 YPEL2Q96QA6 119 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 LINC00467Q9BRT7 94 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 MED20Q9H944 212 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 NDUFAF4Q9P032 175 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 VAPAQ9P0L0 249 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 ABRACLQ9P1F3 81 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 IKZF2Q9UKS7 526 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 RPH3ALQ9UNE2 315 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 GMEB1Q9Y692 573 aa2.34□□□□□ -2.03
LRCH3-213ENST00000471667 UBDO15205 165 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 NUPL2O15504 423 aaKnown RBP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 OGG1O15527 345 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 SNX3O60493 162 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PITX3O75364 302 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 APOHP02749 345 aaPredicted RBP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 IGKV1-16P04430 117 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 H1F0P07305 194 aaKnown RBP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 BPGMP07738 259 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 RRASP10301 218 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PTBP1P26599 531 aaKnown RBP eCLIP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 OMPP47874 163 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PCP4P48539 62 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PSMD7P51665 324 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 MRPS25P82663 173 aaKnown RBP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 IRF3Q14653 427 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 RSU1Q15404 277 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 FCN2Q15485 313 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PRSS8Q16651 343 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 IFI44LQ53G44 452 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 PSMG4Q5JS54 123 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 LY6G6FQ5SQ64 297 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 AADACL4Q5VUY2 407 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 ERICH5Q6P6B1 374 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 ZNF781Q8N8C0 355 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 EIF1ADQ8N9N8 165 aaKnown RBP2.33□□□□□ -2.04
LRCH3-213ENST00000471667 SLC37A3Q8NCC5 494 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 OR5D18Q8NGL1 313 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 S100A13Q99584 98 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 SH3GL1Q99961 368 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 GFRA4Q9GZZ7 299 aa2.33□□□□□ -2.04
LRCH3-213ENST00000471667 RIBC2Q9H4K1 309 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms