RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TRBV10-2A0A0K0K1G8 114 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 KRT75O95678 551 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 DDTP30046 118 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 TNFAIP6P98066 277 aaPredicted RBP0.39□□□□□ -2.35
RBM39-228ENST00000471635 MGAT3Q09327 533 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 CLEC6AQ6EIG7 209 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.39□□□□□ -2.35
RBM39-228ENST00000471635 DHFR2Q86XF0 187 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 SLC22A24Q8N4F4 322 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 OR1M1Q8NGA1 313 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 OR8B3Q8NGG8 313 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 DNAJB3Q8WWF6 145 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 DCUN1D5Q9BTE7 237 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 GPR84Q9NQS5 396 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 STRCQ7RTU9 1775 aa0.39□□□□□ -2.35
RBM39-228ENST00000471635 COCHO43405 550 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 NPPAP01160 153 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 HLA-DMBP28068 263 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 RAB13P51153 203 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 PPP1R1AQ13522 171 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 FAM78BQ5VT40 261 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 GID4Q8IVV7 300 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 TBC1D19Q8N5T2 526 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 ZNF676Q8N7Q3 588 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 ZNF565Q8N9K5 539 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 TMEM161BQ8NDZ6 487 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 OR5B17Q8NGF7 314 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 JOSD2Q8TAC2 188 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 ANKRD7Q92527 254 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 KCTD7Q96MP8 289 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 C7orf50Q9BRJ6 194 aaKnown RBP0.38□□□□□ -2.35
RBM39-228ENST00000471635 CHMP4BQ9H444 224 aaKnown RBP0.38□□□□□ -2.35
RBM39-228ENST00000471635 SPACA1Q9HBV2 294 aa0.38□□□□□ -2.35
RBM39-228ENST00000471635 SPANXB1Q9NS25 103 aaPredicted RBP0.38□□□□□ -2.35
RBM39-228ENST00000471635 IMP3Q9NV31 184 aaKnown RBP0.38□□□□□ -2.35
RBM39-228ENST00000471635 IGKV1-9A0A0C4DH69 117 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 IGHV1-69-2A0A0G2JMI3 117 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 IRGMA1A4Y4 181 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 TMEM212A6NML5 194 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 FAM25EA8MYX2 175 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 I3L521 148 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 SDCBPO00560 298 aaPredicted RBP0.37□□□□□ -2.35
RBM39-228ENST00000471635 GEMIN2O14893 280 aaKnown RBP0.37□□□□□ -2.35
RBM39-228ENST00000471635 IL3P08700 152 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 UBBP0CG47 229 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 SULT1A3P0DMM9 295 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 SULT1A4P0DMN0 295 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 S100A7P31151 101 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 HAAOP46952 286 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 CSN1S1P47710 185 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 REG1BP48304 166 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 CDC34P49427 236 aaPredicted RBP0.37□□□□□ -2.35
RBM39-228ENST00000471635 UBE2G2P60604 165 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 C5orf46Q6UWT4 87 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 FAM19A2Q8N3H0 131 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 ERMAPQ96PL5 475 aaPredicted RBP0.37□□□□□ -2.35
RBM39-228ENST00000471635 UPF3BQ9BZI7 483 aaKnown RBP0.37□□□□□ -2.35
RBM39-228ENST00000471635 AK3Q9UIJ7 227 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 DKKL1Q9UK85 242 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 BAIAP2Q9UQB8 552 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 POLR1DQ9Y2S0 133 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 PXMP4Q9Y6I8 212 aa0.37□□□□□ -2.35
RBM39-228ENST00000471635 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 OR4C45A6NMZ5 311 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 CALUO43852 315 aaPredicted RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 IGHV3-7P01780 117 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 CLPSP04118 112 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 KRT7P08729 469 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 OCMP0CE72 109 aaPredicted RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 OR4D2P58180 307 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 POLR2GP62487 172 aaKnown RBP eCLIP0.36□□□□□ -2.35
RBM39-228ENST00000471635 SUPT4H1P63272 117 aaKnown RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 ZNF345Q14585 488 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 CST9Q5W186 159 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 TNFAIP8L2Q6P589 184 aaPredicted RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 Q8N402 240 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 TMEM251Q8N6I4 163 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 PLEKHJ1Q9NW61 149 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 PAQR5Q9NXK6 330 aaPredicted RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 RSL24D1Q9UHA3 163 aaKnown RBP0.36□□□□□ -2.35
RBM39-228ENST00000471635 FUT9Q9Y231 359 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 EXPH5Q8NEV8 1989 aa0.36□□□□□ -2.35
RBM39-228ENST00000471635 GGT3PA6NGU5 568 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 DISC1C4P0D8 188 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 SLC22A1O15245 554 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 PMP2P02689 132 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 TYMSP04818 313 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 FAM228BP0C875 321 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 MAP2K4P45985 399 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 FXYD2P54710 66 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 SKP1P63208 163 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 RUNX1Q01196 453 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 ZNF846Q147U1 533 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 NDUFA5Q16718 116 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 TEX36Q5VZQ5 186 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 HIST2H3AQ71DI3 136 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 YIPF3Q9GZM5 350 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 MAP1LC3AQ9H492 121 aa0.35□□□□□ -2.35
RBM39-228ENST00000471635 C15orf41Q9Y2V0 281 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms