RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 E7EQL1 145 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 OPRK1P41145 380 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 CD81P60033 236 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 FBXL19-AS1Q494R0 122 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 TREML4Q6UXN2 200 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 C8orf31Q8N9H6 132 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 C2CD4CQ8TF44 421 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 CCL17Q92583 94 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 DYNLRB1Q9NP97 96 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 KCNIP2Q9NS61 270 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 SLC35D1Q9NTN3 355 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM242Q9NWH2 141 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 KAAG1Q9UBP8 84 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 IFNA4P05014 189 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 CDC34P49427 236 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-205ENST00000471582 LRRC10Q5BKY1 277 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 C1QL4Q86Z23 238 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 ABHD12Q8N2K0 398 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 OR13D1Q8NGV5 346 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 SDF2L1Q9HCN8 221 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 ENY2Q9NPA8 101 aa15.22■□□□□ 0.03
COL20A1-205ENST00000471582 TET2Q6N021 2002 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-205ENST00000471582 ATXN7O15265 892 aaPredicted RBP15.21■□□□□ 0.03
COL20A1-205ENST00000471582 NDUFB3O43676 98 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 FCN3O75636 299 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 NPY1RP25929 384 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 WDR25Q64LD2 544 aaPredicted RBP15.21■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM200BQ69YZ2 307 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 FAM71F2Q6NXP2 309 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 OR51B2Q9Y5P1 312 aa15.21■□□□□ 0.03
COL20A1-205ENST00000471582 SMCO3A2RU48 225 aa15.21■□□□□ 0.02
COL20A1-205ENST00000471582 FAM90A27PA6NNH2 459 aa15.21■□□□□ 0.02
COL20A1-205ENST00000471582 FNDC10F2Z333 226 aa15.21■□□□□ 0.02
COL20A1-205ENST00000471582 UPK2O00526 184 aa15.21■□□□□ 0.02
COL20A1-205ENST00000471582 APOBEC3AP31941 199 aaPredicted RBP15.21■□□□□ 0.02
COL20A1-205ENST00000471582 OSR1Q8TAX0 266 aaPredicted RBP15.21■□□□□ 0.02
COL20A1-205ENST00000471582 LSM4Q9Y4Z0 139 aaKnown RBP15.21■□□□□ 0.02
COL20A1-205ENST00000471582 B9A039 149 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 CD3EP07766 207 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 ATP5IP56385 69 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-205ENST00000471582 PRCDQ00LT1 54 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 LINC00518Q8N0U6 118 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 ZNF596Q8TC21 504 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 TMPRSS5Q9H3S3 457 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 NPVFQ9HCQ7 196 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 FKBP11Q9NYL4 201 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 BET1LQ9NYM9 111 aa15.2■□□□□ 0.02
COL20A1-205ENST00000471582 ZNF727A8MUV8 499 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 HMGB3O15347 200 aaKnown RBP15.19■□□□□ 0.02
COL20A1-205ENST00000471582 IGKV1-16P04430 117 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 CCL3L1P16619 93 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 CYP2G1PQ6ZSU1 146 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 LINC00311Q8N616 119 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 MGST2Q99735 147 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 GGTLC1Q9BX51 225 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 KALRNO60229 2985 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 EIF3GO75821 320 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL20A1-205ENST00000471582 KBTBD11O94819 623 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 APOA2P02652 100 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 ELOBQ15370 118 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 NAT8Q9UHE5 227 aa15.19■□□□□ 0.02
COL20A1-205ENST00000471582 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.18■□□□□ 0.02
COL20A1-205ENST00000471582 OR5AN1Q8NGI8 311 aa15.18■□□□□ 0.02
COL20A1-205ENST00000471582 OR5B3Q8NH48 314 aa15.18■□□□□ 0.02
COL20A1-205ENST00000471582 H1FXQ92522 213 aaKnown RBP15.18■□□□□ 0.02
COL20A1-205ENST00000471582 NEUROG1Q92886 237 aa15.18■□□□□ 0.02
COL20A1-205ENST00000471582 SMIM7Q9BQ49 75 aa15.18■□□□□ 0.02
COL20A1-205ENST00000471582 MRPL20Q9BYC9 149 aaKnown RBP15.18■□□□□ 0.02
COL20A1-205ENST00000471582 PLEKHA3Q9HB20 300 aa15.18■□□□□ 0.02
COL20A1-205ENST00000471582 IGHV1-69-2A0A0G2JMI3 117 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 A0A1W2PPV4 95 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 C5orf52A6NGY3 159 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 J3QR06 171 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 YIF1AO95070 293 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 CA2P00918 260 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 S100A6P06703 90 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 LOXP28300 417 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-205ENST00000471582 RND2P52198 227 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 LYPD2Q6UXB3 125 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 CTDSP1Q9GZU7 261 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 ZNRD1Q9P1U0 126 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 CTSZQ9UBR2 303 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 PXMP4Q9Y6I8 212 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 ROS1P08922 2347 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 A0A087X0M5 115 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 A0A1B0GX30 115 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 SRRM4A7MD48 611 aaKnown RBP15.17■□□□□ 0.02
COL20A1-205ENST00000471582 H0YJW9 148 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 DVL1O14640 695 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 TMEM177Q53S58 311 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 ARSJQ5FYB0 599 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-205ENST00000471582 TEPPQ6URK8 271 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 Q8WTZ3 238 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 TMEM186Q96B77 213 aa15.17■□□□□ 0.02
COL20A1-205ENST00000471582 NEIL1Q96FI4 390 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-205ENST00000471582 YLPM1P49750 1951 aaKnown RBP15.17■□□□□ 0.02
COL20A1-205ENST00000471582 CLDN34H7C241 214 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 SAA1P0DJI8 122 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms