RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
TTC28-205ENST00000469670 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
TTC28-205ENST00000469670 RAB27BO00194 218 aa13.35□□□□□ -0.27
TTC28-205ENST00000469670 CTSDP07339 412 aaPredicted RBP13.35□□□□□ -0.27
TTC28-205ENST00000469670 GNB3P16520 340 aa13.35□□□□□ -0.27
TTC28-205ENST00000469670 PTBP1P26599 531 aaKnown RBP eCLIP13.35□□□□□ -0.27
TTC28-205ENST00000469670 RPL8P62917 257 aaKnown RBP13.35□□□□□ -0.27
TTC28-205ENST00000469670 RAB22AQ9UL26 194 aa13.35□□□□□ -0.27
TTC28-205ENST00000469670 A0A075B6Q4 140 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 PRSS29PA6NIE9 313 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 MFNGO00587 321 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 IGLV2-14P01704 120 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 HLA-GP17693 338 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 ADMP35318 185 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 Q6ZS49 121 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 SSX9Q7RTT3 188 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 OR4A5Q8NH83 315 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 TCTEX1D2Q8WW35 142 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 MND1Q9BWT6 205 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 KRTAP4-5Q9BYR2 181 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 PLCXD1Q9NUJ7 323 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 THYN1Q9P016 225 aa13.34□□□□□ -0.27
TTC28-205ENST00000469670 SLC22A5O76082 557 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 TALDO1P37837 337 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 IRF3Q14653 427 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 SSX1Q16384 188 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 BPIFB6Q8NFQ5 453 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 OR10R2Q8NGX6 335 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 HSD17B10Q99714 261 aaKnown RBP13.33□□□□□ -0.28
TTC28-205ENST00000469670 C20orf24Q9BUV8 137 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
TTC28-205ENST00000469670 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
TTC28-205ENST00000469670 HRASP01112 189 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 HLA-DQB1P01920 261 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
TTC28-205ENST00000469670 NFYAP23511 347 aaPredicted RBP13.32□□□□□ -0.28
TTC28-205ENST00000469670 GADD45AP24522 165 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 RANBP1P43487 201 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
TTC28-205ENST00000469670 OR2B8PP59922 312 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 TMEM91Q6ZNR0 172 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 DHRSXQ8N5I4 330 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 VN1R17PQ8TDU5 208 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 FKBP14Q9NWM8 211 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 SPATA2Q9UM82 520 aa13.32□□□□□ -0.28
TTC28-205ENST00000469670 MUC4Q99102 2169 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 IGLC7A0M8Q6 106 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 K7EMT4 169 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 NDUFA4O00483 81 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 EIF4EBP1Q13541 118 aaPredicted RBP13.31□□□□□ -0.28
TTC28-205ENST00000469670 SPHARQ15513 63 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 MFSD4AQ8N468 514 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
TTC28-205ENST00000469670 BET1LQ9NYM9 111 aa13.31□□□□□ -0.28
TTC28-205ENST00000469670 IGKV1D-13A0A0B4J2D9 117 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 ERICH4A6NGS2 130 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 RTL8CO15255 209 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 ARL6IP5O75915 188 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
TTC28-205ENST00000469670 IGKV1-13P0DP09 117 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 TFPI2P48307 235 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 TMEM187Q14656 261 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 HES5Q5TA89 166 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 LIPKQ5VXJ0 399 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 C8orf59Q8N0T1 100 aaPredicted RBP13.3□□□□□ -0.28
TTC28-205ENST00000469670 UFD1Q92890 307 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 RNF2Q99496 336 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 HRASLSQ9HDD0 168 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 TAS2R8Q9NYW2 309 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 LSM2Q9Y333 95 aaKnown RBP13.3□□□□□ -0.28
TTC28-205ENST00000469670 V9GY05 133 aa13.3□□□□□ -0.28
TTC28-205ENST00000469670 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 GNAO1P09471 354 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 CTXN2P0C2S0 81 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 TIMM50Q3ZCQ8 353 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 NR2C2APQ86WQ0 139 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 CHRDL1Q9BU40 450 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 SMPXQ9UHP9 88 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 ETV7Q9Y603 341 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 PKD1P98161 4303 aa13.29□□□□□ -0.28
TTC28-205ENST00000469670 CYB5BO43169 146 aa13.28□□□□□ -0.28
TTC28-205ENST00000469670 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
TTC28-205ENST00000469670 DTYMKP23919 212 aa13.28□□□□□ -0.28
TTC28-205ENST00000469670 CALRP27797 417 aaKnown RBP13.28□□□□□ -0.28
TTC28-205ENST00000469670 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
TTC28-205ENST00000469670 ZNF66Q6ZN08 573 aa13.28□□□□□ -0.28
TTC28-205ENST00000469670 Q8NAQ8 132 aa13.28□□□□□ -0.28
TTC28-205ENST00000469670 GPHA2Q96T91 129 aa13.28□□□□□ -0.28
TTC28-205ENST00000469670 SRSF8Q9BRL6 282 aaKnown RBP13.28□□□□□ -0.28
TTC28-205ENST00000469670 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
TTC28-205ENST00000469670 IGKV3-7A0A075B6H7 116 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 TRAV10A0A0B4J240 114 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 C15orf62A8K5M9 175 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms