RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 HLA-GP17693 338 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 MAS1LP35410 378 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 HOXA1P49639 335 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 BRWD1-AS2P59051 145 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 RPL15P61313 204 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 UBA52P62987 128 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 IAH1Q2TAA2 248 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 KRTAP24-1Q3LI83 254 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 GGNBP1Q5YKI7 109 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 SLC35E3Q7Z769 313 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 FOXRED2Q8IWF2 684 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 PUSL1Q8N0Z8 303 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 Q8N9W7 124 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 SPATA3Q8NHX4 192 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM167AQ8TBQ9 72 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 PIFOQ8TCI5 191 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 ARPC1AQ92747 370 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 RBMXL1Q96E39 390 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 PRSS22Q9GZN4 317 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 TPSG1Q9NRR2 321 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 GSKIPQ9P0R6 139 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 NSG2Q9Y328 171 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 OR51B2Q9Y5P1 312 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 A0A0B4J293 547 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 A0A1W2PN81 502 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 UPK2O00526 184 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 MED6O75586 246 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 NXPH3O95157 252 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 IGKV1-5P01602 117 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 OR9G9P0C7N8 305 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 PET100P0DJ07 73 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 SLC25A6P12236 298 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 CHRNA7P36544 502 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 VDAC2P45880 294 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 RPL27AP46776 148 aaKnown RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 S100A10P60903 97 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 RRAS2P62070 204 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 CYCSP99999 105 aaKnown RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 FXYD3Q14802 87 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 PRSS8Q16651 343 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 OR5M8Q8NGP6 311 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 OR1L8Q8NGR8 309 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 OR5B3Q8NH48 314 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 OR2T6Q8NHC8 308 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 GPR146Q96CH1 333 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 RITA1Q96K30 269 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 FYTTD1Q96QD9 318 aaKnown RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 C19orf24Q9BVV8 132 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 QTRT1Q9BXR0 403 aaKnown RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF430Q9H8G1 570 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 PLEKHA3Q9HB20 300 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 ESM1Q9NQ30 184 aa6.46□□□□□ -1.38
HDAC6-216ENST00000468949 FOXA2Q9Y261 457 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
HDAC6-216ENST00000468949 SH2D7A6NKC9 451 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-216ENST00000468949 AP4M1O00189 453 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 CYB5BO43169 146 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 OPN1MWP04001 364 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 OPN1MW2P0DN77 364 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 OPN1MW3P0DN78 364 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 COMPP49747 757 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-216ENST00000468949 TMEM267Q0VDI3 215 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-216ENST00000468949 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 IZUMO4Q1ZYL8 232 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 NMSQ5H8A3 153 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF562Q6V9R5 426 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 CADM3Q8N126 398 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 SRSF12Q8WXF0 261 aaKnown RBP6.45□□□□□ -1.38
HDAC6-216ENST00000468949 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 HIPK2Q9H2X6 1198 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 ZFP57Q9NU63 452 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 TMEM14BQ9NUH8 114 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 COA4Q9NYJ1 87 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 ZNF257Q9Y2Q1 563 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 COL6A5A8TX70 2615 aa6.45□□□□□ -1.38
HDAC6-216ENST00000468949 IGHV7-81A0A0B4J1V7 117 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 TRAV3A0A0B4J244 114 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 A0A0G2JRQ6 117 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 L7N2F9 121 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 ATP6V0E1O15342 81 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 ST8SIA3O43173 380 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 SIX6O95475 246 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 RLN2P04090 185 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 CRYGBP07316 175 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 TRAPPC2P0DI81 140 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 TRAPPC2BP0DI82 140 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 NKX2-1P43699 371 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 SPCS3P61009 180 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 VAMP2P63027 116 aa6.44□□□□□ -1.38
HDAC6-216ENST00000468949 RPP30P78346 268 aaKnown RBP6.44□□□□□ -1.38
HDAC6-216ENST00000468949 SLC35B1P78383 322 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms