RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SSX2Q16385 188 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 CCDC144NLQ6NUI1 221 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 HAPLN4Q86UW8 402 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 STPG2Q8N412 459 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 OR5B3Q8NH48 314 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 COMMD5Q9GZQ3 224 aa15.28■□□□□ 0.04
SMC4-209ENST00000468653 TEX50A0A1B0GTY4 177 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 LINC00862A6NCI5 91 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 OOSP1A8MZH6 123 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 IFNA5P01569 189 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 CD1BP29016 333 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 PAX8Q06710 450 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 SLC38A11Q08AI6 406 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 DEFB113Q30KQ7 82 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 SLC25A24Q6NUK1 477 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 OR10P1Q8NGE3 313 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.04
SMC4-209ENST00000468653 C15orf62A8K5M9 175 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 VENTXO95231 258 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 PRCDQ00LT1 54 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 TEX45Q8NA69 505 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 RNF141Q8WVD5 230 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 RNF5Q99942 180 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 TBL2Q9Y4P3 447 aaKnown RBP15.26■□□□□ 0.03
SMC4-209ENST00000468653 DOPEY2Q9Y3R5 2298 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 TET2Q6N021 2002 aaPredicted RBP15.26■□□□□ 0.03
SMC4-209ENST00000468653 MSMBP08118 114 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 OR8U8P0C7N1 319 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 SEC11BP0C7V7 166 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 OR1L8Q8NGR8 309 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 LRRC20Q8TCA0 184 aa15.26■□□□□ 0.03
SMC4-209ENST00000468653 PINX1Q96BK5 328 aaKnown RBP15.26■□□□□ 0.03
SMC4-209ENST00000468653 ZNF430Q9H8G1 570 aaPredicted RBP15.26■□□□□ 0.03
SMC4-209ENST00000468653 SCAF4O95104 1147 aaKnown RBP15.25■□□□□ 0.03
SMC4-209ENST00000468653 SPP1P10451 314 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 PAX6P26367 422 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 CNTFRP26992 372 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 PSG5Q15238 335 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 CFHR4Q92496 578 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 PTPN13Q12923 2485 aa15.25■□□□□ 0.03
SMC4-209ENST00000468653 PMS2P5A8MQ11 134 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 B4DSR2 109 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 F2RL1P55085 397 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 HABP2Q14520 560 aaPredicted RBP15.24■□□□□ 0.03
SMC4-209ENST00000468653 ATP6V1FQ16864 119 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 HIST2H2BCQ6DN03 193 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 LRRC75A-AS1Q8N1F1 130 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 SCGB1C1Q8TD33 95 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 CXorf58Q96LI9 332 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 SH3BGRL3Q9H299 93 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 TPSG1Q9NRR2 321 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 FBN2P35556 2912 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 IGKV1D-33P01593 117 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 IGKV1-33P01594 117 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 ATP6V0CP27449 155 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 RAB11AP62491 216 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 SLC24A4Q8NFF2 622 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 C17orf50Q8WW18 174 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 MALSU1Q96EH3 234 aa15.24■□□□□ 0.03
SMC4-209ENST00000468653 GNPNAT1Q96EK6 184 aaPredicted RBP15.24■□□□□ 0.03
SMC4-209ENST00000468653 METTL1Q9UBP6 276 aaKnown RBP15.24■□□□□ 0.03
SMC4-209ENST00000468653 TENM4Q6N022 2769 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 TNCP24821 2201 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 ZNF705EA8MWA4 302 aaPredicted RBP15.23■□□□□ 0.03
SMC4-209ENST00000468653 RRHO14718 337 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 MOSP00540 346 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 FAM157CP0CG43 387 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 SAA4P35542 130 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 SULT1A2P50226 295 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 PJVKQ0ZLH3 352 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 HES1Q14469 280 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 HNF4GQ14541 408 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 ETV3LQ6ZN32 361 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 MMD2Q8IY49 270 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 DYNAPQ8N1N2 210 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 TMEM147Q9BVK8 224 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 NDUFA4L2Q9NRX3 87 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 SIGLEC9Q9Y336 463 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 AUP1Q9Y679 476 aa15.23■□□□□ 0.03
SMC4-209ENST00000468653 ANKRD17O75179 2603 aaKnown RBP15.23■□□□□ 0.03
SMC4-209ENST00000468653 CENPVL3A0A0U1RRI6 287 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 NPFFO15130 113 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 FGF16O43320 207 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 ACTL6BO94805 426 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 IFNA4P05014 189 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 CRYGBP07316 175 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 NPY1RP25929 384 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 PRSS8Q16651 343 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 COMMD7Q86VX2 200 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 THNSL2Q86YJ6 484 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 PFDN2Q9UHV9 154 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 ABCA2Q9BZC7 2435 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 CENPEQ02224 2701 aa15.22■□□□□ 0.03
SMC4-209ENST00000468653 ASH1LQ9NR48 2969 aaKnown RBP15.22■□□□□ 0.03
SMC4-209ENST00000468653 UBE2L5PA0A1B0GUS4 154 aa15.21■□□□□ 0.03
SMC4-209ENST00000468653 A0A1W2PN81 502 aa15.21■□□□□ 0.03
SMC4-209ENST00000468653 SNRNP70P08621 437 aaKnown RBP15.21■□□□□ 0.03
SMC4-209ENST00000468653 CD24P25063 80 aa15.21■□□□□ 0.03
SMC4-209ENST00000468653 CHRNA7P36544 502 aa15.21■□□□□ 0.03
SMC4-209ENST00000468653 RUNX1Q01196 453 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms