RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SULT1C2O00338 296 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 TPPPO94811 219 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 IFNA6P05013 189 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 SCAND1P57086 179 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 MSMO1Q15800 293 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 GUCA2BQ16661 112 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 FAM209BQ5JX69 171 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 GPHB5Q86YW7 130 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 SLC5A7Q9GZV3 580 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 SLC2A8Q9NY64 477 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 BET1LQ9NYM9 111 aa18.42■□□□□ 0.54
PTCH1-210ENST00000468211 EPPK1P58107 5090 aaKnown RBP18.41■□□□□ 0.54
PTCH1-210ENST00000468211 IGLV11-55A0A075B6I3 123 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 TMEM213A2RRL7 107 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 MFSD2BA6NFX1 497 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 CBLN1P23435 193 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 FXYD4P59646 89 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 OR2B8PP59922 312 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 Q9H521 79 aa18.41■□□□□ 0.54
PTCH1-210ENST00000468211 MEIS3P1A6NDR6 274 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 NEDD8Q15843 81 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 SRD5A3Q9H8P0 318 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 HRASLSQ9HDD0 168 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 TECRQ9NZ01 308 aaKnown RBP18.4■□□□□ 0.54
PTCH1-210ENST00000468211 MLXQ9UH92 298 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 HYDINQ4G0P3 5121 aa18.4■□□□□ 0.54
PTCH1-210ENST00000468211 A0A0A6YYH2 397 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 A6NJ64 397 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 OR11H12B2RN74 326 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 RBFOX2O43251 390 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTCH1-210ENST00000468211 ZNF818PQ6ZRF7 136 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 ZBTB34Q8NCN2 500 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 OR4A5Q8NH83 315 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 EEF1AKMT3Q96AZ1 226 aa18.39■□□□□ 0.53
PTCH1-210ENST00000468211 IGLC7A0M8Q6 106 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 ZNF320A2RRD8 509 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 UPK2O00526 184 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 DEFA4P12838 97 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 TGFBR1P36897 503 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 TMEM61Q8N0U2 210 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 DIABLOQ9NR28 239 aa18.38■□□□□ 0.53
PTCH1-210ENST00000468211 A8MWP6 167 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 DHFRP00374 187 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 CLEC3BP05452 202 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 HIST1H1BP16401 226 aaKnown RBP18.37■□□□□ 0.53
PTCH1-210ENST00000468211 TAS2R31P59538 309 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 POU2AF1Q16633 256 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 UNQ9165/PRO28630Q6UXU0 137 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 TMEM17Q86X19 198 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 UXS1Q8NBZ7 420 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 OR5AP2Q8NGF4 316 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 OR51H1Q8NH63 302 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 GIMAP1Q8WWP7 306 aa18.37■□□□□ 0.53
PTCH1-210ENST00000468211 S1PR2O95136 353 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 HPRT1P00492 218 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 RPA2P15927 270 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 FAM106AQ4KMX7 169 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 TM4SF20Q53R12 229 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 OR10W1Q8NGF6 305 aa18.36■□□□□ 0.53
PTCH1-210ENST00000468211 NQO2P16083 231 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 GNRHRP30968 328 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 CATR1Q13166 79 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 ZNF57Q68EA5 555 aaPredicted RBP18.35■□□□□ 0.53
PTCH1-210ENST00000468211 ZNF502Q8TBZ5 544 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 AIFM2Q9BRQ8 373 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 TMEM140Q9NV12 185 aa18.35■□□□□ 0.53
PTCH1-210ENST00000468211 TRBV7-1A0A0A6YYK4 115 aa18.34■□□□□ 0.53
PTCH1-210ENST00000468211 IGHV3-35A0A0C4DH35 117 aa18.34■□□□□ 0.53
PTCH1-210ENST00000468211 SCAF4O95104 1147 aaKnown RBP18.34■□□□□ 0.53
PTCH1-210ENST00000468211 GPR183P32249 361 aa18.34■□□□□ 0.53
PTCH1-210ENST00000468211 XRCC3O43542 346 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 CBX5P45973 191 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 RFX2P48378 723 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 AADACL3Q5VUY0 350 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 BTNL8Q6UX41 500 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 CXorf58Q96LI9 332 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 COMMD5Q9GZQ3 224 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 PLEKHA2Q9HB19 425 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 EHFQ9NZC4 300 aa18.33■□□□□ 0.52
PTCH1-210ENST00000468211 DMBX1Q8NFW5 382 aa18.32■□□□□ 0.52
PTCH1-210ENST00000468211 PLECQ15149 4684 aaKnown RBP18.32■□□□□ 0.52
PTCH1-210ENST00000468211 TEX50A0A1B0GTY4 177 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 C8orf88P0DMB2 117 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 HERV-K104P61576 105 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 WT1-ASQ06250 92 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 KCTD21Q4G0X4 260 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 DHRS11Q6UWP2 260 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 SLC16A13Q7RTY0 426 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 OR52B4Q8NGK2 314 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 QTRT1Q9BXR0 403 aaKnown RBP18.31■□□□□ 0.52
PTCH1-210ENST00000468211 IFT46Q9NQC8 304 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 ANAPC10Q9UM13 185 aa18.31■□□□□ 0.52
PTCH1-210ENST00000468211 RLN1P04808 185 aa18.3■□□□□ 0.52
PTCH1-210ENST00000468211 PTBP1P26599 531 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTCH1-210ENST00000468211 RPS19P39019 145 aaKnown RBP18.3■□□□□ 0.52
PTCH1-210ENST00000468211 MFAP2P55001 183 aa18.3■□□□□ 0.52
PTCH1-210ENST00000468211 CD300LFQ8TDQ1 290 aa18.3■□□□□ 0.52
PTCH1-210ENST00000468211 S100A16Q96FQ6 103 aaKnown RBP18.3■□□□□ 0.52
PTCH1-210ENST00000468211 SRSF8Q9BRL6 282 aaKnown RBP18.3■□□□□ 0.52
PTCH1-210ENST00000468211 COMMD9Q9P000 198 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms