RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 KCTD9Q7L273 389 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 TCF24Q7RTU0 167 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 TMEM167AQ8TBQ9 72 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 UQCC2Q9BRT2 126 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 KCNK15Q9H427 330 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 PTTG2Q9NZH5 202 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 MRPS7Q9Y2R9 242 aaKnown RBP7.27□□□□□ -1.25
HDAC3-203ENST00000467533 IGHV3OR16-13A0A075B7E8 117 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 IGHV3-74A0A0B4J1X5 117 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 CYB5BO43169 146 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 EIF4EP06730 217 aaKnown RBP7.26□□□□□ -1.25
HDAC3-203ENST00000467533 GYS2P54840 703 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 EMP1P54849 157 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 XGP55808 180 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 ATP6AP1Q15904 470 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 YIF1BQ5BJH7 314 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 SERTAD4-AS1Q5TG53 156 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 TMEM88Q6PEY1 159 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 FAM24BQ8N5W8 94 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 OR52I1Q8NGK6 324 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 OR4A4PQ8NGN8 299 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 OR10J5Q8NHC4 309 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 SLC29A1Q99808 456 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 TM2D1Q9BX74 207 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 AMBNQ9NP70 447 aa7.26□□□□□ -1.25
HDAC3-203ENST00000467533 TRBV5-7A0A0A0MS05 114 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 A0A0A6YYD4 124 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 KNCNA6PVL3 124 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 NUPL2O15504 423 aaKnown RBP7.25□□□□□ -1.25
HDAC3-203ENST00000467533 FABP7O15540 132 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 YIF1AO95070 293 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 LIMS3P0CW19 117 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 LIMS4P0CW20 117 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 RPL11P62913 178 aaKnown RBP7.25□□□□□ -1.25
HDAC3-203ENST00000467533 RPL8P62917 257 aaKnown RBP7.25□□□□□ -1.25
HDAC3-203ENST00000467533 Q56UQ5 140 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 IGSF11Q5DX21 431 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 PUSL1Q8N0Z8 303 aaKnown RBP7.25□□□□□ -1.25
HDAC3-203ENST00000467533 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 CMSS1Q9BQ75 279 aaKnown RBP7.25□□□□□ -1.25
HDAC3-203ENST00000467533 GINS4Q9BRT9 223 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 CABLES2Q9BTV7 478 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 MS4A6AQ9H2W1 248 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 RABAC1Q9UI14 185 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 PRELID3BQ9Y3B1 194 aa7.25□□□□□ -1.25
HDAC3-203ENST00000467533 FAT1Q14517 4588 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 CGB1A6NKQ9 187 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 SOCS1O15524 211 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 ST8SIA3O43173 380 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-203ENST00000467533 HLA-GP17693 338 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 CELP19835 753 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 RPS11P62280 158 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC3-203ENST00000467533 GNGT1P63211 74 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 UNC119Q13432 240 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 UBE2UQ5VVX9 321 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 TMPRSS11AQ6ZMR5 421 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 Q6ZSN1 163 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 ZFP41Q8N8Y5 198 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 C15orf53Q8NAA6 179 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 OR4S2Q8NH73 311 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 ZNF503Q96F45 646 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 ZNF414Q96IQ9 312 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 C17orf77Q96MU5 243 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 NIPSNAP3BQ9BS92 247 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 C21orf62Q9NYP8 219 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 ARL2BPQ9Y2Y0 163 aa7.24□□□□□ -1.25
HDAC3-203ENST00000467533 TRBV6-7A0A0A0MS04 114 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 TRAV14DV4A0A0A6YYC5 116 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 TEX48A0A1B0GUV7 120 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 IGLC7A0M8Q6 106 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 TMEM189A5PLL7 270 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 OGG1O15527 345 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 CD5P06127 495 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 CALB2P22676 271 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 RELQ04864 619 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-203ENST00000467533 ACTL10Q5JWF8 245 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 AMIGO2Q86SJ2 522 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 DERL3Q96Q80 235 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
HDAC3-203ENST00000467533 TRAV2A0A0B4J234 112 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 PNMA8CA0A1B0GUJ8 204 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 J3QRK9 145 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 LALBAP00709 142 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 ZNF688P0C7X2 276 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 GNB3P16520 340 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 CD36P16671 472 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 BTF3P20290 206 aaKnown RBP7.22□□□□□ -1.25
HDAC3-203ENST00000467533 ETV1P50549 477 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 OR2B8PP59922 312 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 DLK1P80370 383 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 MRPS15P82914 257 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms