RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 CLDND2Q8NHS1 167 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 VSTM2AQ8TAG5 236 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 RARRES2Q99969 163 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 UNKLQ9H9P5 680 aaKnown RBP16.66■□□□□ 0.26
CCDC78-207ENST00000466708 WASHC3Q9Y3C0 194 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 IFNA4P05014 189 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 NPY1RP25929 384 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 UQCRFS1P47985 274 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 NPBWR1P48145 328 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 REG1BP48304 166 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 ELLP55199 621 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-207ENST00000466708 KHDC3LQ587J8 217 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 ZNF787Q6DD87 383 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 CLRN3Q8NCR9 226 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 OR4A5Q8NH83 315 aa16.66■□□□□ 0.26
CCDC78-207ENST00000466708 HSPB1P04792 205 aaKnown RBP16.65■□□□□ 0.26
CCDC78-207ENST00000466708 PMS2P11Q13670 270 aa16.65■□□□□ 0.26
CCDC78-207ENST00000466708 TMEM170AQ8WVE7 144 aa16.65■□□□□ 0.26
CCDC78-207ENST00000466708 CHODLQ9H9P2 273 aa16.65■□□□□ 0.26
CCDC78-207ENST00000466708 PLEKHA3Q9HB20 300 aa16.65■□□□□ 0.26
CCDC78-207ENST00000466708 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
CCDC78-207ENST00000466708 TPRP12270 2363 aaKnown RBP16.64■□□□□ 0.26
CCDC78-207ENST00000466708 IGHV2-26A0A0B4J1V2 119 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 FAM74A7A6NL05 159 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 TSPAN4O14817 238 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 NUPL2O15504 423 aaKnown RBP16.64■□□□□ 0.25
CCDC78-207ENST00000466708 USF1P22415 310 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-207ENST00000466708 HAGHQ16775 308 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 FAM74A3Q4VXF1 159 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 FFAR4Q5NUL3 377 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 ACSM6Q6P461 480 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 RPP25LQ8N5L8 163 aaKnown RBP16.64■□□□□ 0.25
CCDC78-207ENST00000466708 LY6G5BQ8NDX9 201 aa16.64■□□□□ 0.25
CCDC78-207ENST00000466708 TEX50A0A1B0GTY4 177 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 IGLV1-47P01700 117 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 LIPFP07098 398 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 ICAM4Q14773 271 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 LCN15Q6UWW0 184 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 BEND2Q8NDZ0 799 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 CLEC7AQ9BXN2 247 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 MAP1LC3B2A6NCE7 125 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 DIAPH2-AS1Q14236 149 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 HLA-DRB5Q30154 266 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 SOHLH1Q5JUK2 328 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 MALRD1Q5VYJ5 2156 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 OR10G4Q8NGN3 311 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 OR10G9Q8NGN4 311 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 OR10G7Q8NGN6 311 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 TMEM167AQ8TBQ9 72 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 HINT2Q9BX68 163 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 MAP1LC3BQ9GZQ8 125 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 NPVFQ9HCQ7 196 aa16.63■□□□□ 0.25
CCDC78-207ENST00000466708 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 FNDC10F2Z333 226 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 LY6HO94772 140 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 IGKV1D-33P01593 117 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 IGKV1-33P01594 117 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 RPL8P62917 257 aaKnown RBP16.62■□□□□ 0.25
CCDC78-207ENST00000466708 ACOT6Q3I5F7 207 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-207ENST00000466708 TREML4Q6UXN2 200 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 ACTR3CQ9C0K3 210 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-207ENST00000466708 PATZ1Q9HBE1 687 aaKnown RBP16.62■□□□□ 0.25
CCDC78-207ENST00000466708 PKD1L2Q7Z442 2459 aa16.62■□□□□ 0.25
CCDC78-207ENST00000466708 LOC102723971A0A1B0GUV8 181 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 SMCO3A2RU48 225 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 CA2P00918 260 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 SRP19P09132 144 aaKnown RBP16.61■□□□□ 0.25
CCDC78-207ENST00000466708 OR13C7P0DN81 318 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 LGALS7P47929 136 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 HNF4GQ14541 408 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 SSX7Q7RTT5 188 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 OR1L8Q8NGR8 309 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 COMMD5Q9GZQ3 224 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 GNG13Q9P2W3 67 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 INS-IGF2F8WCM5 200 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 CYB5BO43169 146 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 IFNA1P01562 189 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 MYOD1P15172 320 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 Q8N7P7 452 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 AMMECR1Q9Y4X0 333 aaPredicted RBP16.61■□□□□ 0.25
CCDC78-207ENST00000466708 RELNP78509 3460 aa16.61■□□□□ 0.25
CCDC78-207ENST00000466708 SPTBN1Q01082 2364 aaKnown RBP16.6■□□□□ 0.25
CCDC78-207ENST00000466708 A0A1W2PPR1 153 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 BCL2P10415 239 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 OPRK1P41145 380 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 VMA21Q3ZAQ7 101 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 RXFP4Q8TDU9 374 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 NDUFA4L2Q9NRX3 87 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 KCNIP2Q9NS61 270 aa16.6■□□□□ 0.25
CCDC78-207ENST00000466708 BUB1B-PAK6H3BSN5 160 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 IGLV2-23P01705 113 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 BSXQ3C1V8 233 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 C2orf83Q53S99 150 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 A0A1W2PN81 502 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 CHRNA7P36544 502 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 FGF8P55075 233 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-207ENST00000466708 TMEM88Q6PEY1 159 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 RBMS3Q6XE24 437 aaKnown RBP16.59■□□□□ 0.25
CCDC78-207ENST00000466708 P2RX4Q99571 388 aa16.59■□□□□ 0.25
CCDC78-207ENST00000466708 LSM4Q9Y4Z0 139 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms