RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SPAG16Q8N0X2 631 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 OR4A5Q8NH83 315 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 AIFM2Q9BRQ8 373 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 YTHDF1Q9BYJ9 559 aaKnown RBP14.43□□□□□ -0.1
COL9A3-206ENST00000466532 Q9H521 79 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 HRASLSQ9HDD0 168 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 BET1LQ9NYM9 111 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 SELENOKQ9Y6D0 94 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 LOC100506127A0A0U1RQW1 187 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 RBMY1BA6NDE4 496 aaKnown RBP14.42□□□□□ -0.1
COL9A3-206ENST00000466532 RBMY1EA6NEQ0 496 aaKnown RBP14.42□□□□□ -0.1
COL9A3-206ENST00000466532 ATP6V1G2O95670 118 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 PPYP01298 95 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 RBMY1DP0C7P1 496 aaKnown RBP14.42□□□□□ -0.1
COL9A3-206ENST00000466532 CBLN1P23435 193 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 KLK9Q2XQG4 91 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 ZNF773Q6PK81 442 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 ZBTB34Q8NCN2 500 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 SLC5A7Q9GZV3 580 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 KLK9Q9UKQ9 250 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 HYDINQ4G0P3 5121 aa14.42□□□□□ -0.1
COL9A3-206ENST00000466532 EPPK1P58107 5090 aaKnown RBP14.41□□□□□ -0.1
COL9A3-206ENST00000466532 IGLV11-55A0A075B6I3 123 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 A0A0A6YYH2 397 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 ZNF320A2RRD8 509 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 A6NJ64 397 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 CGB1A6NKQ9 187 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 SULT1C2O00338 296 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 FCER2P06734 321 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 FXYD4P59646 89 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 CATR1Q13166 79 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 FAM106AQ4KMX7 169 aa14.41□□□□□ -0.1
COL9A3-206ENST00000466532 TMEM213A2RRL7 107 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 MFSD2BA6NFX1 497 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 A8MWP6 167 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 RBFOX2O43251 390 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL9A3-206ENST00000466532 TAS2R31P59538 309 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 OR2B8PP59922 312 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 ZNF57Q68EA5 555 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-206ENST00000466532 TMEM61Q8N0U2 210 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 IL17DQ8TAD2 202 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 CXorf58Q96LI9 332 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 AUNIPQ9H7T9 357 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 DIABLOQ9NR28 239 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 MLXQ9UH92 298 aa14.4□□□□□ -0.1
COL9A3-206ENST00000466532 PLECQ15149 4684 aaKnown RBP14.39□□□□□ -0.11
COL9A3-206ENST00000466532 TRBV7-1A0A0A6YYK4 115 aa14.39□□□□□ -0.11
COL9A3-206ENST00000466532 HPRT1P00492 218 aa14.39□□□□□ -0.11
COL9A3-206ENST00000466532 NQO2P16083 231 aa14.39□□□□□ -0.11
COL9A3-206ENST00000466532 SLC16A13Q7RTY0 426 aa14.39□□□□□ -0.11
COL9A3-206ENST00000466532 COMMD5Q9GZQ3 224 aa14.39□□□□□ -0.11
COL9A3-206ENST00000466532 TRAV3A0A0B4J244 114 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 UPK2O00526 184 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 CLEC3BP05452 202 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 CBX5P45973 191 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 NEDD8Q15843 81 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 POU2AF1Q16633 256 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 ZNF818PQ6ZRF7 136 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 TMEM17Q86X19 198 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 UXS1Q8NBZ7 420 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 OR5AP2Q8NGF4 316 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 OR51H1Q8NH63 302 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 GIMAP1Q8WWP7 306 aa14.38□□□□□ -0.11
COL9A3-206ENST00000466532 IGLC7A0M8Q6 106 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 MEIS3P1A6NDR6 274 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 SCAF4O95104 1147 aaKnown RBP14.37□□□□□ -0.11
COL9A3-206ENST00000466532 GPR183P32249 361 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 AADACL3Q5VUY0 350 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 DMBX1Q8NFW5 382 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 OR52B4Q8NGK2 314 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 TMEM140Q9NV12 185 aa14.37□□□□□ -0.11
COL9A3-206ENST00000466532 S1PR2O95136 353 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 HERV-K104P61576 105 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 TM4SF20Q53R12 229 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 BTNL8Q6UX41 500 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 UNQ9165/PRO28630Q6UXU0 137 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 ZNF502Q8TBZ5 544 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 SRSF8Q9BRL6 282 aaKnown RBP14.36□□□□□ -0.11
COL9A3-206ENST00000466532 PLEKHA2Q9HB19 425 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 IFT46Q9NQC8 304 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 THYN1Q9P016 225 aa14.36□□□□□ -0.11
COL9A3-206ENST00000466532 JTBO76095 146 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 RPA2P15927 270 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 ANKRD55Q3KP44 614 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 PLET1Q6UQ28 207 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 OR10W1Q8NGF6 305 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 CD300LFQ8TDQ1 290 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 BORCS5Q969J3 196 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 QTRT1Q9BXR0 403 aaKnown RBP14.35□□□□□ -0.11
COL9A3-206ENST00000466532 EHFQ9NZC4 300 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 COMMD9Q9P000 198 aa14.35□□□□□ -0.11
COL9A3-206ENST00000466532 IGHV3-35A0A0C4DH35 117 aa14.34□□□□□ -0.11
COL9A3-206ENST00000466532 TMEM127O75204 238 aa14.34□□□□□ -0.11
COL9A3-206ENST00000466532 GNRHRP30968 328 aa14.34□□□□□ -0.11
COL9A3-206ENST00000466532 ZNF585BQ52M93 769 aa14.34□□□□□ -0.11
COL9A3-206ENST00000466532 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
COL9A3-206ENST00000466532 BIRC6Q9NR09 4857 aa14.33□□□□□ -0.11
COL9A3-206ENST00000466532 CYB5BO43169 146 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 XRCC3O43542 346 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms