RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 THOC7Q6I9Y2 204 aaKnown RBP13.27□□□□□ -0.29
USP39-211ENST00000465282 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 H2BFWTQ7Z2G1 175 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 PHB2Q99623 299 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 SRSF8Q9BRL6 282 aaKnown RBP13.27□□□□□ -0.29
USP39-211ENST00000465282 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.29
USP39-211ENST00000465282 COMMD5Q9GZQ3 224 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 A0A1W2PN81 502 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 UPK1BO75841 260 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 IGKV1-39P01597 117 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 IGKV1D-39P04432 117 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 AKR1C4P17516 323 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 CHRNA7P36544 502 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 CCR6P51684 374 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 SRPXP78539 464 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 SP6Q3SY56 376 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 CENPSQ8N2Z9 138 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
USP39-211ENST00000465282 IL22RA2Q969J5 263 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 TMEM56Q96MV1 263 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 PRNDQ9UKY0 176 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 TMEM56-RWDD3S4R434 201 aa13.26□□□□□ -0.29
USP39-211ENST00000465282 BTCP35070 178 aa13.25□□□□□ -0.29
USP39-211ENST00000465282 CDX1P47902 265 aaPredicted RBP13.25□□□□□ -0.29
USP39-211ENST00000465282 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
USP39-211ENST00000465282 HSD17B13Q7Z5P4 300 aaPredicted RBP13.25□□□□□ -0.29
USP39-211ENST00000465282 TMED4Q7Z7H5 227 aa13.25□□□□□ -0.29
USP39-211ENST00000465282 ZNF695Q8IW36 515 aa13.25□□□□□ -0.29
USP39-211ENST00000465282 MYOZ3Q8TDC0 251 aa13.25□□□□□ -0.29
USP39-211ENST00000465282 RBPMSQ93062 196 aaKnown RBP13.25□□□□□ -0.29
USP39-211ENST00000465282 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
USP39-211ENST00000465282 TRAV3A0A0B4J244 114 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 PF4V1P10720 104 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 RAB9AP51151 201 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 AKR1C2P52895 323 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR2B8PP59922 312 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 RPL23AP62750 156 aaKnown RBP13.24□□□□□ -0.29
USP39-211ENST00000465282 SUPT4H1P63272 117 aaKnown RBP13.24□□□□□ -0.29
USP39-211ENST00000465282 ASAH1Q13510 395 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR4F17Q8NGA8 305 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR1L8Q8NGR8 309 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
USP39-211ENST00000465282 UBE2E2Q96LR5 201 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 OR4F4Q96R69 305 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 TMEM14BQ9NUH8 114 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 ZNF257Q9Y2Q1 563 aa13.24□□□□□ -0.29
USP39-211ENST00000465282 VWFP04275 2813 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 PKD1L1Q8TDX9 2849 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 C15orf61A6NNL5 157 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 SOX15O60248 233 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 IGKV1-5P01602 117 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 RPLP1P05386 114 aaKnown RBP13.23□□□□□ -0.29
USP39-211ENST00000465282 OR9G9P0C7N8 305 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 P0C879 139 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 TMEM187Q14656 261 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 KHDC1LQ5JSQ8 128 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 ASPHD1Q5U4P2 390 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 ZNF429Q86V71 674 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 SELENOHQ8IZQ5 122 aaKnown RBP13.23□□□□□ -0.29
USP39-211ENST00000465282 TTC9CQ8N5M4 171 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
USP39-211ENST00000465282 QTRT1Q9BXR0 403 aaKnown RBP13.23□□□□□ -0.29
USP39-211ENST00000465282 CACFD1Q9UGQ2 172 aa13.23□□□□□ -0.29
USP39-211ENST00000465282 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 DHFRP00374 187 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 TRAPPC2P0DI81 140 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 TRAPPC2BP0DI82 140 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 C10orf55Q5SWW7 151 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 TMEM268Q5VZI3 342 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 MRPL41Q8IXM3 137 aaKnown RBP13.22□□□□□ -0.29
USP39-211ENST00000465282 LGI3Q8N145 548 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 OR5T1Q8NG75 326 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
USP39-211ENST00000465282 FYTTD1Q96QD9 318 aaKnown RBP13.22□□□□□ -0.29
USP39-211ENST00000465282 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
USP39-211ENST00000465282 A0A0B4J2A0 478 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 TEX50A0A1B0GTY4 177 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 DUXBA0A1W2PPF3 345 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 E7EUB6 86 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 CRYGCP07315 174 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 VAMP1P23763 118 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 RAB25P57735 213 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 ZNF491Q8N8L2 437 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 LHFPL5Q8TAF8 219 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.29
USP39-211ENST00000465282 KLK15Q9H2R5 256 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 NDUFA4L2Q9NRX3 87 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 SHPKQ9UHJ6 478 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms