RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 NEDD4LQ96PU5 975 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 FAAP24Q9BTP7 215 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 NDUFA13Q9P0J0 144 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 COMMD3Q9UBI1 195 aa10.92□□□□□ -0.66
HDAC6-214ENST00000465269 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 A8MWP6 167 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 Q6ZTC4 211 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 C6orf201Q7Z4U5 140 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 SLC38A6Q8IZM9 456 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 Q8N1X5 172 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 FAM89BQ8N5H3 189 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 CD300LFQ8TDQ1 290 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 ACOT12Q8WYK0 555 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 PTX4Q96A99 478 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 PLEKHJ1Q9NW61 149 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 SPATA2Q9UM82 520 aa10.91□□□□□ -0.66
HDAC6-214ENST00000465269 A0A075B6Q4 140 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 TMEM127O75204 238 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 TMEM50BP56557 158 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 PRSS8Q16651 343 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 SAMD12Q8N8I0 201 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 OR56B1Q8NGI3 324 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 ARHGAP5-AS1Q96IT6 56 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 HDHD3Q9BSH5 251 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-214ENST00000465269 DCUN1D5Q9BTE7 237 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 CSTL1Q9H114 145 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 RHBDL2Q9NX52 303 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 ETV7Q9Y603 341 aa10.9□□□□□ -0.66
HDAC6-214ENST00000465269 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 A6NHS1 94 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 MPTX1A8MV57 137 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-214ENST00000465269 RAB27BO00194 218 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 SHOXO15266 292 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 HPGDSO60760 199 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 HLA-DMBP28068 263 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 SCAND1P57086 179 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 FAM106AQ4KMX7 169 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 PLAC9Q5JTB6 97 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 MZT2AQ6P582 158 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 OR10R2Q8NGX6 335 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 OR4A5Q8NH83 315 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 SLC25A38Q96DW6 304 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 CHRDL1Q9BU40 450 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 PECRQ9BY49 303 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 CHMP1AQ9HD42 196 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-214ENST00000465269 ZNF221Q9UK13 617 aa10.89□□□□□ -0.67
HDAC6-214ENST00000465269 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-214ENST00000465269 CTDSP2O14595 271 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 GLAP06280 429 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 GNB3P16520 340 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 UBE2NLQ5JXB2 153 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 AP3S1Q92572 193 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
HDAC6-214ENST00000465269 S100A16Q96FQ6 103 aaKnown RBP10.88□□□□□ -0.67
HDAC6-214ENST00000465269 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-214ENST00000465269 FAT1Q14517 4588 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 TRAV18A0A075B6X5 111 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 ITGB1BP1O14713 200 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 RGS5O15539 181 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 EIF4EP06730 217 aaKnown RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 SCTP09683 121 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 RBMY1A1P0DJD3 496 aaKnown RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 RBMY1CP0DJD4 496 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 RBMY1FQ15415 496 aaKnown RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 CDNFQ49AH0 187 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 TTC9CQ8N5M4 171 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 SLIRPQ9GZT3 109 aaKnown RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 ZNF430Q9H8G1 570 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 DIABLOQ9NR28 239 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 CCDC59Q9P031 241 aaKnown RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 AK3Q9UIJ7 227 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 ELF5Q9UKW6 265 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-214ENST00000465269 HSF4Q9ULV5 492 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
HDAC6-214ENST00000465269 IGKV1-6A0A0C4DH72 117 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 FAM25AB3EWG3 89 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 FAM25CB3EWG5 89 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 FAM25GB3EWG6 89 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 TSPAN4O14817 238 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 NAPSAO96009 420 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 RPA2P15927 270 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 ELK1P19419 428 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 OR4A47Q6IF82 309 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
HDAC6-214ENST00000465269 EDARADDQ8WWZ3 215 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms