RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 OR4A5Q8NH83 315 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 FANCD2OSQ96PS1 177 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 AUNIPQ9H7T9 357 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 RETNQ9HD89 108 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 IFT46Q9NQC8 304 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
HOXB3-204ENST00000465120 TECRQ9NZ01 308 aaKnown RBP11.68□□□□□ -0.54
HOXB3-204ENST00000465120 TENM2Q9NT68 2774 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 A0A1B0GW64 132 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 OR11H12B2RN74 326 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 LGALS9O00182 355 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 HPRT1P00492 218 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 CRYGCP07315 174 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 CTRB1P17538 263 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 CBX5P45973 191 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 HERV-K104P61576 105 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 MSMO1Q15800 293 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 AADACL3Q5VUY0 350 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 CTRB2Q6GPI1 263 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 OR5AP2Q8NGF4 316 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 OR51H1Q8NH63 302 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 WDR89Q96FK6 387 aaPredicted RBP11.67□□□□□ -0.54
HOXB3-204ENST00000465120 FAM110AQ9BQ89 295 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 SRD5A3Q9H8P0 318 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 DMRT1Q9Y5R6 373 aa11.67□□□□□ -0.54
HOXB3-204ENST00000465120 RPA2P15927 270 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 NQO2P16083 231 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 CBLN1P23435 193 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 TAS2R31P59538 309 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 ZNF818PQ6ZRF7 136 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 S100A16Q96FQ6 103 aaKnown RBP11.66□□□□□ -0.54
HOXB3-204ENST00000465120 CXorf58Q96LI9 332 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
HOXB3-204ENST00000465120 DYNC2H1Q8NCM8 4307 aaKnown RBP11.65□□□□□ -0.54
HOXB3-204ENST00000465120 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 LCE6AA0A183 80 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 UPK2O00526 184 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 RBFOX2O43251 390 aaKnown RBP eCLIP11.65□□□□□ -0.54
HOXB3-204ENST00000465120 CLEC3BP05452 202 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 OR2B8PP59922 312 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
HOXB3-204ENST00000465120 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 CD300LFQ8TDQ1 290 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 BORCS5Q969J3 196 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 EHFQ9NZC4 300 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 THYN1Q9P016 225 aa11.65□□□□□ -0.54
HOXB3-204ENST00000465120 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 MFSD2BA6NFX1 497 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 CYB5BO43169 146 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 XRCC3O43542 346 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 S1PR2O95136 353 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 GPR183P32249 361 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
HOXB3-204ENST00000465120 ERVK-16P61578 105 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 CROCCP3Q8IVE0 287 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 UXS1Q8NBZ7 420 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 OR52B4Q8NGK2 314 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 HIPK2Q9H2X6 1198 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
HOXB3-204ENST00000465120 IGHV3-35A0A0C4DH35 117 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 PMP2P02689 132 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 TGFBR1P36897 503 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 RFX2P48378 723 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 PLET1Q6UQ28 207 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 ZNF2Q9BSG1 426 aaPredicted RBP11.63□□□□□ -0.55
HOXB3-204ENST00000465120 HINT2Q9BX68 163 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 PLEKHA2Q9HB19 425 aa11.63□□□□□ -0.55
HOXB3-204ENST00000465120 TMEM213A2RRL7 107 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 TMEM127O75204 238 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 RLN1P04808 185 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 TRAPPC2P0DI81 140 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 TRAPPC2BP0DI82 140 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 UBE2NLQ5JXB2 153 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 TMEM69Q5SWH9 247 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
HOXB3-204ENST00000465120 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 SAMD12Q8N8I0 201 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 OR10W1Q8NGF6 305 aa11.62□□□□□ -0.55
HOXB3-204ENST00000465120 OR5H2Q8NGV7 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms