RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 OPN1MWP04001 364 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 OPN1MW2P0DN77 364 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 OPN1MW3P0DN78 364 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 IRF2P14316 349 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 THBS3P49746 956 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 NDUFA6P56556 154 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 SPNS3Q6ZMD2 512 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 FAM210BQ96KR6 192 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 GGTLC1Q9BX51 225 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 MANBALQ9NQG1 85 aa15.32■□□□□ 0.04
TSPAN4-210ENST00000464987 ZNF729A6NN14 1252 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 SRRM4A7MD48 611 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 TMEM250H0YL14 139 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BKO60814 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BJP06899 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 CT45A6P0DMU7 189 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 CT45A5P0DMU8 189 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 CT45A7P0DMV0 189 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BOP23527 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BBP33778 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BDP58876 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BCP62807 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 RPP30P78346 268 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST2H2BEQ16778 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 C16orf82Q7Z2V1 217 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 OR51G1Q8NGK1 321 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 RND1Q92730 232 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BHQ93079 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BNQ99877 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HIST1H2BMQ99879 126 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 TMEM14BQ9NUH8 114 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 TRGV8A0A0C4DH27 118 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 IFITM10A6NMD0 228 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 C17orf100A8MU93 164 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 SEC14L6B5MCN3 397 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 ATP5G3P48201 142 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 GFRALQ6UXV0 394 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 SSMEM1Q8WWF3 244 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 HINT2Q9BX68 163 aa15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 RPUSD1Q9UJJ7 312 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-210ENST00000464987 C11orf94C9JXX5 98 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 CCL3L1P16619 93 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 BSXQ3C1V8 233 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 SLC25A48Q6ZT89 311 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 C1orf87Q8N0U7 546 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 MIOXQ9UGB7 285 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 FOXA2Q9Y261 457 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 PXMP4Q9Y6I8 212 aa15.3■□□□□ 0.04
TSPAN4-210ENST00000464987 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 HSPE1P61604 102 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 ABHD5Q8WTS1 349 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 CORO2AQ92828 525 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 LINC00574Q9H8X3 128 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 RAB9BQ9NP90 201 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 CA2P00918 260 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 HOXA5P20719 270 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 OPRK1P41145 380 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 C4orf17Q53FE4 359 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 SLC24A4Q8NFF2 622 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 FRZBQ92765 325 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 TCEAL7Q9BRU2 100 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 SLC25A10Q9UBX3 287 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 CEP295Q9C0D2 2601 aa15.29■□□□□ 0.04
TSPAN4-210ENST00000464987 A0A1W2PPV4 95 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 NPY1RP25929 384 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 CLEC12BQ2HXU8 276 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 TMEM204Q9BSN7 226 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 ELOVL1Q9BW60 279 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 LSM4Q9Y4Z0 139 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 ARL14EPLP0DKL9 152 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 TNFRSF1AP19438 455 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 GFI1BQ5VTD9 330 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 OR5T1Q8NG75 326 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 OR13D1Q8NGV5 346 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 NEIL1Q96FI4 390 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 DERL1Q9BUN8 251 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 GGACTQ9BVM4 153 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 AURKAIP1Q9NWT8 199 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 ELOVL5Q9NYP7 299 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 OR51B2Q9Y5P1 312 aa15.28■□□□□ 0.04
TSPAN4-210ENST00000464987 MPDU1O75352 247 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 LY86O95711 162 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 TRGC1P0CF51 173 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 GNB1P62873 340 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 FOXC1Q12948 553 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 CST9LP1Q5W188 147 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 LYPD2Q6UXB3 125 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 MOB3BQ86TA1 216 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 NEUROG1Q92886 237 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 RAB1CQ92928 201 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 NPVFQ9HCQ7 196 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 SLC35D1Q9NTN3 355 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 JKAMPQ9P055 326 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 LINC00312Q9Y6C7 94 aa15.27■□□□□ 0.04
TSPAN4-210ENST00000464987 hADV38S2A0JD32 116 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 PHOX2AO14813 284 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms