RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SULT1C4O75897 302 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 OR2J2O76002 312 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF682O95780 498 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 LHBP01229 141 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 DBIP07108 87 aaKnown RBP2.75□□□□□ -1.97
PTCD3-205ENST00000464541 CD7P09564 240 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF705DP0CH99 300 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-205ENST00000464541 COX4I1P13073 169 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 SDC4P31431 198 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 OPRM1P35372 400 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 AKR1C3P42330 323 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 SERPINB10P48595 397 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
PTCD3-205ENST00000464541 CST6Q15828 149 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 WDR59Q6PJI9 974 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 Q6ZS49 121 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 SCXQ7RTU7 201 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 UMODL1-AS1Q8N2C9 162 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 CD200R1Q8TD46 325 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 KLK6Q92876 244 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 CMBLQ96DG6 245 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 CAPZA3Q96KX2 299 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 GPR82Q96P67 336 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 C20orf27Q9GZN8 174 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 MED29Q9NX70 200 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 COPZ2Q9P299 210 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 JPT1Q9UK76 154 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 MIA2Q96PC5 1412 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 WDR7Q9Y4E6 1490 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TRBV20OR9-2A0A075B6H5 130 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TRBV19A0A075B6N1 114 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 IGHV3OR15-7A0A075B7D8 119 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 IGKV1-6A0A0C4DH72 117 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 SIGLEC16A6NMB1 481 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 DEGS1O15121 323 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 FSTL3O95633 263 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 IGKV1-39P01597 117 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 IGKV1D-39P04432 117 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 BPGMP07738 259 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TFPTP0C1Z6 253 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 PTHLHP12272 177 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 RPS4Y1P22090 263 aaKnown RBP2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TGFBR1P36897 503 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 PSMD8P48556 350 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 LINC00313P59037 77 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TAS2R45P59539 299 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 DEFA1P59665 94 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TNFAIP6P98066 277 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-205ENST00000464541 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 SMIM21Q3B7S5 101 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TNFAIP8L3Q5GJ75 292 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 LYRM7Q5U5X0 104 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 RPL13AP3Q6NVV1 102 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 C16orf47Q6ZP98 133 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-205ENST00000464541 C1orf174Q8IYL3 243 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 KRTCAP2Q8N6L1 136 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 OR4D11Q8NGI4 311 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 OR13C8Q8NGS7 320 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 MRPL30Q8TCC3 161 aaKnown RBP2.74□□□□□ -1.97
PTCD3-205ENST00000464541 RAB2BQ8WUD1 216 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 DNAJC9Q8WXX5 260 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 PLEKHB2Q96CS7 222 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 C1QTNF6Q9BXI9 259 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 NKX6-2Q9C056 277 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-205ENST00000464541 IMUPQ9GZP8 106 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TMEM126AQ9H061 195 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 TMEM222Q9H0R3 208 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 NUBP2Q9Y5Y2 271 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 SETD5Q9C0A6 1442 aa2.74□□□□□ -1.97
PTCD3-205ENST00000464541 SEC16AO15027 2179 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 CHD2O14647 1828 aaKnown RBP2.73□□□□□ -1.97
PTCD3-205ENST00000464541 TRAV9-1A0A075B6T8 112 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 IZUMO1RA6ND01 250 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 OR5H14A6NHG9 310 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 RFPL4AA6NLU0 287 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 RFPL4AL1F8VTS6 287 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 COX7A2LO14548 114 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 BANF1O75531 89 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SMIM10L2AP0DMW4 78 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SMIM10L2BP0DMW5 78 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 OGNP20774 298 aaKnown RBP2.73□□□□□ -1.97
PTCD3-205ENST00000464541 MPV17P39210 176 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 CKS1BP61024 79 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 RPS11P62280 158 aaKnown RBP eCLIP2.73□□□□□ -1.97
PTCD3-205ENST00000464541 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
PTCD3-205ENST00000464541 PDGFRLQ15198 375 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 WHAMMP3Q1A5X7 153 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 Q6Q795 121 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 ANGPTL5Q86XS5 388 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SGPP2Q8IWX5 399 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 ST6GALNAC3Q8NDV1 305 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SLC25A40Q8TBP6 338 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SLC7A6Q92536 515 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 TVP23CQ96ET8 276 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 C2orf50Q96LR7 162 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms