RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TPRKBQ9Y3C4 175 aa12.82□□□□□ -0.36
HMGN1-210ENST00000464078 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 TSPAN4O14817 238 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 RGS10O43665 173 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 HRASP01112 189 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 DEFA4P12838 97 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 HLA-GP17693 338 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 GPR183P32249 361 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 OR10A3P58181 314 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 OR4A5Q8NH83 315 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 ZNF436Q9C0F3 470 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-210ENST00000464078 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
HMGN1-210ENST00000464078 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-210ENST00000464078 IGLC7A0M8Q6 106 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 J3QRK9 145 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 TIMM50Q3ZCQ8 353 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 HACD4Q5VWC8 232 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 STPG3Q8N7X2 389 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 SRSF8Q9BRL6 282 aaKnown RBP12.8□□□□□ -0.36
HMGN1-210ENST00000464078 TAS2R8Q9NYW2 309 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 SPATA2Q9UM82 520 aa12.8□□□□□ -0.36
HMGN1-210ENST00000464078 REG1AP05451 166 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 FGF2P09038 288 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 PTBP1P26599 531 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGN1-210ENST00000464078 OR2B8PP59922 312 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 MSMO1Q15800 293 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 PLET1Q6UQ28 207 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 MFSD4AQ8N468 514 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 AIFM2Q9BRQ8 373 aa12.79□□□□□ -0.36
HMGN1-210ENST00000464078 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
HMGN1-210ENST00000464078 RBFOX2O43251 390 aaKnown RBP eCLIP12.78□□□□□ -0.361e-18■□□□□ 8.3
HMGN1-210ENST00000464078 TGOLN2O43493 480 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 DEDDO75618 318 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 CRHBPP24387 322 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 SSX9Q7RTT3 188 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 PHLDA1Q8WV24 401 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-210ENST00000464078 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 THYN1Q9P016 225 aa12.78□□□□□ -0.36
HMGN1-210ENST00000464078 PCLOQ9Y6V0 5065 aa12.77□□□□□ -0.36
HMGN1-210ENST00000464078 RAB3BP20337 219 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 MYL9P24844 172 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 VN1R17PQ8TDU5 208 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 NUDCD2Q8WVJ2 157 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 ATP6V0BQ99437 205 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 NDUFB11Q9NX14 153 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 UBQLN2Q9UHD9 624 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 ANXA10Q9UJ72 324 aa12.77□□□□□ -0.37
HMGN1-210ENST00000464078 VPS13DQ5THJ4 4388 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 IGHV3-35A0A0C4DH35 117 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 SCGNO76038 276 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 S1PR2O95136 353 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 TBCEQ15813 527 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-210ENST00000464078 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
HMGN1-210ENST00000464078 TMEM235A6NFC5 223 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 TAS2R31P59538 309 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 THOC7Q6I9Y2 204 aaKnown RBP12.75□□□□□ -0.37
HMGN1-210ENST00000464078 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 ZNF367Q7RTV3 350 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 BSCL2Q96G97 398 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-210ENST00000464078 GPHA2Q96T91 129 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 COMMD5Q9GZQ3 224 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 CCDC90BQ9GZT6 254 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 HRASLSQ9HDD0 168 aa12.75□□□□□ -0.37
HMGN1-210ENST00000464078 TRDV1A0A1B0GX56 115 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 NDUFA4O00483 81 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 CYB5BO43169 146 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 SSX5O60225 188 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-210ENST00000464078 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
HMGN1-210ENST00000464078 QTRT1Q9BXR0 403 aaKnown RBP12.74□□□□□ -0.37
HMGN1-210ENST00000464078 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
HMGN1-210ENST00000464078 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 K7EMT4 169 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 UPK2O00526 184 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 NQO2P16083 231 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 RPL35AP18077 110 aaKnown RBP12.73□□□□□ -0.37
HMGN1-210ENST00000464078 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-210ENST00000464078 GNG2P59768 71 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 OR13F1Q8NGS4 319 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 C6orf62Q9GZU0 229 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-210ENST00000464078 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
HMGN1-210ENST00000464078 TRAV3A0A0B4J244 114 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
HMGN1-210ENST00000464078 TNFSF12O43508 249 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms