RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 NEURL2Q9BR09 285 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 IGLV11-55A0A075B6I3 123 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 SULT1C2O00338 296 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 TNFSF12O43508 249 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 XRCC3O43542 346 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 HLA-AP01891 365 aaKnown RBP10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 NQO2P16083 231 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 ARL3P36405 182 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 OR2B8PP59922 312 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 NEDD8Q15843 81 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 FAM106AQ4KMX7 169 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 C19orf35Q6ZS72 473 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 S100A16Q96FQ6 103 aaKnown RBP10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 PLEKHA2Q9HB19 425 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 CEPT1Q9Y6K0 416 aa10.84□□□□□ -0.67
SNRNP40-203ENST00000463988 TRBV7-1A0A0A6YYK4 115 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 A8MWP6 167 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 UPK2O00526 184 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 DEFA4P12838 97 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 CBLN1P23435 193 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 DHRS11Q6UWP2 260 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 CLEC19AQ6UXS0 136 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF818PQ6ZRF7 136 aa10.83□□□□□ -0.68
SNRNP40-203ENST00000463988 SACSQ9NZJ4 4579 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 LCE6AA0A183 80 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 CD7P09564 240 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 MYOD1P15172 320 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 FXYD4P59646 89 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 HERV-K104P61576 105 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 ZFAND6Q6FIF0 208 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 THOC7Q6I9Y2 204 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 HSD17B13Q7Z5P4 300 aaPredicted RBP10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 CADM3Q8N126 398 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 COMMD5Q9GZQ3 224 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 HIPK2Q9H2X6 1198 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 PLEKHA3Q9HB20 300 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 IFT46Q9NQC8 304 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 THYN1Q9P016 225 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 ANAPC10Q9UM13 185 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 STARD9Q9P2P6 4700 aa10.82□□□□□ -0.68
SNRNP40-203ENST00000463988 TMEM213A2RRL7 107 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 IGHV3-23P01764 117 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 REG1AP05451 166 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 CLEC3BP05452 202 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 GNRHRP30968 328 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 AADACL3Q5VUY0 350 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF57Q68EA5 555 aaPredicted RBP10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 OR51H1Q8NH63 302 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 MARC2Q969Z3 335 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
SNRNP40-203ENST00000463988 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF320A2RRD8 509 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 MFSD2BA6NFX1 497 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 CYB5BO43169 146 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 S1PR2O95136 353 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 FCER2P06734 321 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 C8orf88P0DMB2 117 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 NAT1P18440 290 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 EDN2P20800 178 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 F2RP25116 425 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 SLC16A13Q7RTY0 426 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 DMBX1Q8NFW5 382 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 IL17DQ8TAD2 202 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 VN1R17PQ8TDU5 208 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 MOB3AQ96BX8 217 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 WDR89Q96FK6 387 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 EHFQ9NZC4 300 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 S4R3C0 116 aa10.8□□□□□ -0.68
SNRNP40-203ENST00000463988 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 PGLYRP1O75594 196 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 RFX2P48378 723 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 ELLP55199 621 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 TAS2R46P59540 309 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 TAS2R20P59543 309 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 ERVK-16P61578 105 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 TMEM69Q5SWH9 247 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 TMEM61Q8N0U2 210 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 SAMD12Q8N8I0 201 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 GDPD1Q8N9F7 314 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 UXS1Q8NBZ7 420 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms