RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SRRM4A7MD48 611 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 LINC00473A8K010 186 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 BRI3O95415 125 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 HERV-K104P61576 105 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 PRSS8Q16651 343 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 AADACL3Q5VUY0 350 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 FAAP20Q6NZ36 180 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 TERB2Q8NHR7 220 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 RSRP1Q9BUV0 290 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 TBC1D24Q9ULP9 559 aa17.04■□□□□ 0.32
PDLIM7-206ENST00000463411 ANKRD34BA5PLL1 514 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 LYRM1O43325 122 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 ACTL6BO94805 426 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 IDO2Q6ZQW0 420 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 OR51S1Q8NGJ8 323 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 FXYD6Q9H0Q3 95 aa17.03■□□□□ 0.32
PDLIM7-206ENST00000463411 IGKV1D-13A0A0B4J2D9 117 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 MSGN1A6NI15 193 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 FCGR3BO75015 233 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 APELAP0DMC3 54 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 IGKV1-13P0DP09 117 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 SURF2Q15527 256 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 LPCAT3Q6P1A2 487 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 SRSF12Q8WXF0 261 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 USMG5Q96IX5 58 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 MCUBQ9NWR8 336 aa17.02■□□□□ 0.32
PDLIM7-206ENST00000463411 OR9G9P0C7N8 305 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 BTCP35070 178 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 DEFA1P59665 94 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 DEFA3P59666 94 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 ZBTB34Q8NCN2 500 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 OR13C8Q8NGS7 320 aa17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 PEF1Q9UBV8 284 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-206ENST00000463411 FXYD4P59646 89 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 DEFA5Q01523 94 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 TATDN3Q17R31 274 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 MRGPRG-AS1Q2M3A8 158 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 SCGB2B2Q4G0G5 96 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 OR2B11Q5JQS5 317 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 MZT2BQ6NZ67 158 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 MMD2Q8IY49 270 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 MRGPRFQ96AM1 343 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 HSD17B10Q99714 261 aaKnown RBP17■□□□□ 0.31
PDLIM7-206ENST00000463411 SPIN2AQ99865 258 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 SPIN2BQ9BPZ2 258 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 SLC25A21Q9BQT8 299 aaPredicted RBP17■□□□□ 0.31
PDLIM7-206ENST00000463411 SLC5A7Q9GZV3 580 aa17■□□□□ 0.31
PDLIM7-206ENST00000463411 LINC00854A0A1B0GVQ3 168 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 IGLV1-51P01701 117 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 ZNF343Q6P1L6 599 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 HAPLN4Q86UW8 402 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 SLC38A6Q8IZM9 456 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 ADAD2Q8NCV1 583 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 OR9G4Q8NGQ1 327 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 OR4S2Q8NH73 311 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 SECTM1Q8WVN6 248 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 TCTEX1D2Q8WW35 142 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 ZNF486Q96H40 463 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 SCGB3A2Q96PL1 93 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 ZNF430Q9H8G1 570 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 TENM3Q9P273 2699 aa16.99■□□□□ 0.31
PDLIM7-206ENST00000463411 FAM223BA6NKX1 122 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 IGLV2-14P01704 120 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 FRMD6-AS1P0C7T7 363 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 GNRHRP30968 328 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 KLF5Q13887 457 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 RBMS2Q15434 407 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 RPEL1Q2QD12 228 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 FAM223AQ8IWN6 122 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 VSTM2AQ8TAG5 236 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 ZFAND1Q8TCF1 268 aa16.98■□□□□ 0.31
PDLIM7-206ENST00000463411 SYNJ2BPP57105 145 aa16.97■□□□□ 0.31
PDLIM7-206ENST00000463411 SBSPONQ8IVN8 264 aa16.97■□□□□ 0.31
PDLIM7-206ENST00000463411 CCL28Q9NRJ3 127 aa16.97■□□□□ 0.31
PDLIM7-206ENST00000463411 COPZ2Q9P299 210 aa16.97■□□□□ 0.31
PDLIM7-206ENST00000463411 GPR132Q9UNW8 380 aa16.97■□□□□ 0.31
PDLIM7-206ENST00000463411 GPR31O00270 319 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 NDUFB6O95139 128 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 CTSDP07339 412 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 RPL30P62888 115 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 RHOGP84095 191 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 EIF4EBP1Q13541 118 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 EXOSC2Q13868 293 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 ZNF818PQ6ZRF7 136 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 SLC25A42Q86VD7 318 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 SGPP2Q8IWX5 399 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 MARCH1Q8TCQ1 289 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 ZMAT4Q9H898 229 aa16.96■□□□□ 0.31
PDLIM7-206ENST00000463411 H0Y980 276 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 CCR6P51684 374 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 RND3P61587 244 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 ATP5G2Q06055 141 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 ZNF66Q6ZN08 573 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 RCHY1Q96PM5 261 aa16.95■□□□□ 0.3
PDLIM7-206ENST00000463411 KBTBD11O94819 623 aa16.94■□□□□ 0.3
PDLIM7-206ENST00000463411 OR2A4O95047 310 aa16.94■□□□□ 0.3
PDLIM7-206ENST00000463411 TRBV12-3P01733 135 aa16.94■□□□□ 0.3
PDLIM7-206ENST00000463411 PGAM2P15259 253 aa16.94■□□□□ 0.3
PDLIM7-206ENST00000463411 KIR2DS2P43631 304 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms