RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 LGALS9CQ6DKI2 356 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 ZFAND6Q6FIF0 208 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 IZUMO2Q6UXV1 221 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 CALHM3Q86XJ0 350 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 STX12Q86Y82 276 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 LRRC25Q8N386 305 aaPredicted RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 LINC00301Q8NCQ3 95 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 GRPEL2Q8TAA5 225 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 LHFPL5Q8TAF8 219 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SLC35G5Q96KT7 338 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 DUSP21Q9H596 190 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 CXorf21Q9HAI6 301 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SAR1AQ9NR31 198 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 CMTM6Q9NX76 183 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 RSL24D1Q9UHA3 163 aaKnown RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 HHLA2Q9UM44 414 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 PKIGQ9Y2B9 76 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 FIS1Q9Y3D6 152 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 NESP48681 1621 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 TARBP1Q13395 1621 aaKnown RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 LTBP4Q8N2S1 1624 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 ABCC6O95255 1503 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 AKAP12Q02952 1782 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 MYOM1P52179 1685 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 ZC3H13Q5T200 1668 aaKnown RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 PBRM1Q86U86 1689 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 ADGRL2O95490 1459 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 CEP152O94986 1710 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 WDR90Q96KV7 1748 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ABCA9Q8IUA7 1624 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 TRPM6Q9BX84 2022 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 OR6C6A6NF89 314 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 A8MWP6 167 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 MIF4GDA9UHW6 222 aaKnown RBP2.14□□□□□ -2.07
USH2A-203ENST00000463147 EEF1E1-BLOC1S5C9J1V9 151 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 TXNDC9O14530 226 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 SOD1P00441 154 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 IFNA14P01570 189 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 SHBGP04278 402 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 HMGN1P05114 100 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 UCHL3P15374 230 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 OR4D2P58180 307 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 VBP1P61758 197 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 BIKQ13323 160 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ZNF141Q15928 474 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 CCDC58Q4VC31 144 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 AMMECR1LQ6DCA0 310 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 NOXRED1Q6NXP6 359 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ARPINQ7Z6K5 226 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 AKAP14Q86UN6 197 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 MSRB3Q8IXL7 192 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 OR5B17Q8NGF7 314 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 SGMS2Q8NHU3 365 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 MS4A6EQ96DS6 147 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 GNPNAT1Q96EK6 184 aaPredicted RBP2.14□□□□□ -2.07
USH2A-203ENST00000463147 CPNE2Q96FN4 548 aaPredicted RBP2.14□□□□□ -2.07
USH2A-203ENST00000463147 IGF2BP2-AS1Q96M15 143 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 PPP1R2P1Q96PQ5 205 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 CCL13Q99616 98 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 TLNRD1Q9H1K6 362 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 VPS29Q9UBQ0 182 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ERGIC3Q9Y282 383 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 MYH7P12883 1935 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ANKARQ7Z5J8 1434 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 SIPA1L1O43166 1804 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 KNDC1Q76NI1 1749 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 RALGAPA2Q2PPJ7 1873 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ATP10BO94823 1461 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 ATP7BP35670 1465 aa2.14□□□□□ -2.07
USH2A-203ENST00000463147 CAMSAP1Q5T5Y3 1602 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 MYH13Q9UKX3 1938 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 IQGAP1P46940 1657 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 A0A087WUJ7 227 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 LOC102725191A0A1B0GVB3 256 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 OR5K4A6NMS3 321 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 A8MUN3 132 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 FAM25AB3EWG3 89 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 FAM25CB3EWG5 89 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 FAM25GB3EWG6 89 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 LST1O00453 97 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 COX7A2LO14548 114 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 SULT1C4O75897 302 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 LY6HO94772 140 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 CNIH1O95406 144 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 NSA2O95478 260 aaKnown RBP2.13□□□□□ -2.07
USH2A-203ENST00000463147 SERPINA1P01009 418 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 CD5P06127 495 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 OR5G3P0C626 314 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 FGF6P10767 208 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 SERPINB1P30740 379 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 SERPINB10P48595 397 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 POLR2GP62487 172 aaKnown RBP eCLIP2.13□□□□□ -2.07
USH2A-203ENST00000463147 ZNF846Q147U1 533 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 BATFQ16520 125 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 PLPPR5Q32ZL2 321 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 AKIRIN2Q53H80 203 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms