RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CTSDP07339 412 aaPredicted RBP4.47□□□□□ -1.69
VPS36-202ENST00000462289 AKAIN1P0CW23 69 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SAA1P0DJI8 122 aaPredicted RBP4.47□□□□□ -1.69
VPS36-202ENST00000462289 UCP1P25874 307 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 CD40LGP29965 261 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SLC6A1P30531 599 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 S100A5P33763 92 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 TAS2R31P59538 309 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 CX3CL1P78423 397 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 RUNX1Q01196 453 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 DHODHQ02127 395 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 IL18Q14116 193 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 PRSS8Q16651 343 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 RTL8BQ17RB0 113 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 AKIRIN2Q53H80 203 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SPANXN2Q5MJ10 180 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 PPP1R27Q86WC6 154 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 Q8N402 240 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 COMMD1Q8N668 190 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 KLHDC1Q8N7A1 406 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 OR4S2Q8NH73 311 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SGMS2Q8NHU3 365 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SECTM1Q8WVN6 248 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 TMEM230Q96A57 120 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 GALNT14Q96FL9 552 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 SEC22AQ96IW7 307 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 C5orf66Q9H5L9 145 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 TNFRSF19Q9NS68 423 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 TMEM140Q9NV12 185 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 PRELID3BQ9Y3B1 194 aa4.47□□□□□ -1.69
VPS36-202ENST00000462289 TRBV9A0A0B4J1U6 114 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CCDC160A6NGH7 325 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SH2D7A6NKC9 451 aaPredicted RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 TEX22C9J3V5 150 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 E7EUB6 86 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 H0Y980 276 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 H3BUA1 57 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 ATP6V0E1O15342 81 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 MPPED1O15442 326 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 PLA2G10O15496 165 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SLC25A17O43808 307 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 KBTBD11O94819 623 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CDS2O95674 445 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CRYZL1O95825 349 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 HPRT1P00492 218 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 RPA2P15927 270 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 MAS1LP35410 378 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 VDAC2P45880 294 aaPredicted RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 HERV-K104P61576 105 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SUPT4H1P63272 117 aaKnown RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 PJVKQ0ZLH3 352 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CATR1Q13166 79 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 FHL3Q13643 280 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 HES1Q14469 280 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 HNF4GQ14541 408 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 PDLIM3Q53GG5 364 aaPredicted RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 PVRIGQ6DKI7 326 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 C10orf99Q6UWK7 81 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SLC35E3Q7Z769 313 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 TMEM17Q86X19 198 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 NDUFA11Q86Y39 141 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CMTM1Q8IZ96 169 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 ZFAND1Q8TCF1 268 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 GLYATL2Q8WU03 294 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 HARBI1Q96MB7 349 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 PRRT1Q99946 306 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SLC25A21Q9BQT8 299 aaPredicted RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 C7orf50Q9BRJ6 194 aaKnown RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 SRSF8Q9BRL6 282 aaKnown RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 CCDC32Q9BV29 185 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 FBXL15Q9H469 300 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 ZNF430Q9H8G1 570 aaPredicted RBP4.46□□□□□ -1.7
VPS36-202ENST00000462289 HRASLSQ9HDD0 168 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 SORL1Q92673 2214 aa4.46□□□□□ -1.7
VPS36-202ENST00000462289 CRYM-AS1A6NIL9 109 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 NCBP2LA6PVI3 153 aaKnown RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 H7C2Y5 167 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 FCGR3BO75015 233 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 OR2A4O95047 310 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 S1PR2O95136 353 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 HRASP01112 189 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 CRYGCP07315 174 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 IL7P13232 177 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 NQO2P16083 231 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 PPP5CP53041 499 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 PIGPP57054 158 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 FXYD4P59646 89 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 AP3S2P59780 193 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 RPS16P62249 146 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms