RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ZNF446Q9NWS9 450 aa3.43□□□□□ -1.86
COPS3-204ENST00000462236 IMPAD1Q9NX62 359 aa3.43□□□□□ -1.86
COPS3-204ENST00000462236 CNOT2Q9NZN8 540 aaKnown RBP3.43□□□□□ -1.86
COPS3-204ENST00000462236 MBD2Q9UBB5 411 aa3.43□□□□□ -1.86
COPS3-204ENST00000462236 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
COPS3-204ENST00000462236 MEIKINA0A087WXM9 373 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 H3BUA1 57 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 TNFRSF11BO00300 401 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 NDUFAB1O14561 156 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 NBR2O15453 112 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 MAGEB4O15481 346 aaPredicted RBP3.42□□□□□ -1.86
COPS3-204ENST00000462236 ORC5O43913 435 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 OR2A4O95047 310 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 CCNB2O95067 398 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 COX4I1P13073 169 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 ATF1P18846 271 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 GZMHP20718 246 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 BMI1P35226 326 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 SYNJ2BPP57105 145 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 TCTAP57738 103 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 CBX1P83916 185 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 LTC4SQ16873 150 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 MICAQ29983 383 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 DEFB114Q30KQ6 69 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 CT45A1Q5HYN5 189 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 BCL2L15Q5TBC7 163 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 FAHD1Q6P587 224 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
COPS3-204ENST00000462236 PLEKHG7Q6ZR37 379 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 SSX6Q7RTT6 188 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 CT45A3Q8NHU0 189 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 CNIH3Q8TBE1 160 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 TMEM14AQ9Y6G1 99 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 V9GYQ6 96 aa3.42□□□□□ -1.86
COPS3-204ENST00000462236 IGHV3-43A0A0B4J1X8 118 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TRAV39A0A0B4J263 110 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 LOC107986453A0A1B0GWG9 222 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 H0YJX3 145 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 FCN1O00602 326 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 DEGS1O15121 323 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 AIREO43918 545 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TRBV12-3P01733 135 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 IGHV3-43DP0DP04 118 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 PRKACBP22694 351 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 IL3RAP26951 378 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TPPP2P59282 170 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 CXCR4P61073 352 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 PSME3P61289 254 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 ZNF85Q03923 595 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
COPS3-204ENST00000462236 GINS1Q14691 196 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 Q1RN00 199 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 ACTBL2Q562R1 376 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 PAN3Q58A45 887 aaKnown RBP3.41□□□□□ -1.86
COPS3-204ENST00000462236 LY6G6FQ5SQ64 297 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 ASCL4Q6XD76 172 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 GAPTQ8N292 157 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 OR56B1Q8NGI3 324 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TEX47Q8TBZ9 253 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TSEN15Q8WW01 171 aaKnown RBP3.41□□□□□ -1.86
COPS3-204ENST00000462236 OPALINQ96PE5 141 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 GGTLC1Q9BX51 225 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TTTY10Q9BZA0 68 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 TMEM231Q9H6L2 316 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 EFCAB1Q9HAE3 211 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 ADGRL4Q9HBW9 690 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 SLC2A8Q9NY64 477 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 IKZF2Q9UKS7 526 aa3.41□□□□□ -1.86
COPS3-204ENST00000462236 V9GYY5 206 aaPredicted RBP3.41□□□□□ -1.86
COPS3-204ENST00000462236 LOC102724200A0A096LPH7 203 aaPredicted RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 MFSD2BA6NFX1 497 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 FBLL1A6NHQ2 334 aaKnown RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 H3BTX0 84 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 SDCBPO00560 298 aaPredicted RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 MAGEB3O15480 346 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 SERPINA3P01011 423 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 TRGV3P03979 118 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 HMGN1P05114 100 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 ISG15P05161 165 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 MRPL3P09001 348 aaKnown RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 DBTP11182 482 aaKnown RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 MAPK3P27361 379 aaPredicted RBP3.4□□□□□ -1.87
COPS3-204ENST00000462236 ACTR3P61158 418 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 GK3PQ14409 553 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 LIPKQ5VXJ0 399 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 OR2T5Q6IEZ7 315 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 UNQ5815/PRO19632Q6UWF5 114 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 ZNF562Q6V9R5 426 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 ZNF833PQ6ZTB9 187 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 TMEM179BQ7Z7N9 219 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 PPP1R27Q86WC6 154 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 SLC35F2Q8IXU6 374 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 LFNGQ8NES3 379 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 OR2T29Q8NH02 315 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 ARL11Q969Q4 196 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
COPS3-204ENST00000462236 PINX1Q96BK5 328 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms