RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 G3V3Q6 166 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 SYNGR2O43760 224 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 SLC25A17O43808 307 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 SSSCA1O60232 199 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 GPR137BO60478 399 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 LY86O95711 162 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 TMEM11P17152 192 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 OR2B8PP59922 312 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 SPCS3P61009 180 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 RPL23AP62750 156 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 RELBQ01201 579 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 TNFRSF9Q07011 255 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 HNF4GQ14541 408 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 PSG5Q15238 335 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 KLF17Q5JT82 389 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 ZNF429Q86V71 674 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 OR11H4Q8NGC9 324 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 RAB40CQ96S21 281 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 COMMD5Q9GZQ3 224 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 ZC4H2Q9NQZ6 224 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 HSPB7Q9UBY9 170 aa12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-203ENST00000461654 NBR2O15453 112 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 CHST1O43916 411 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 ACTL6BO94805 426 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 FGF2P09038 288 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 LYL1P12980 280 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 PAX6P26367 422 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 DYNLT3P51808 116 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 EBI3Q14213 229 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 MMDQ15546 238 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 OR8H1Q8NGG4 311 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 OR52E5Q8NH55 327 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 GRPEL2Q8TAA5 225 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 RNF126Q9BV68 326 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 MFFQ9GZY8 342 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 MEGF9Q9H1U4 602 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 OR5AC2Q9NZP5 309 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 METTL1Q9UBP6 276 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 FBN3Q75N90 2809 aa12.15□□□□□ -0.46
TMEM39A-203ENST00000461654 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 TMEM89A2RUT3 159 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 H0YIZ8 118 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 RRHO14718 337 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 IL6RP08887 468 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 CD24P25063 80 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 MAS1LP35410 378 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 P2RY1P47900 373 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 ACOT7LQ6ZUV0 252 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 RITA1Q96K30 269 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 RBKSQ9H477 322 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 HSPB11Q9Y547 144 aa12.14□□□□□ -0.47
TMEM39A-203ENST00000461654 A0A0D9SG52 128 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 NCBP2LA6PVI3 153 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 OR2F2O95006 317 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 CAV2P51636 162 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 TAS2R30P59541 319 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 RPP30P78346 268 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 OR2F1Q13607 317 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 NPBQ8NG41 125 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 DTD1Q8TEA8 209 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 ESM1Q9NQ30 184 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 WSB1Q9Y6I7 421 aa12.13□□□□□ -0.47
TMEM39A-203ENST00000461654 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 IAPPP10997 89 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 CNTFRP26992 372 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms