RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 OR4A47Q6IF82 309 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 SPARTQ8N0X7 666 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 UXS1Q8NBZ7 420 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 RHBDL2Q9NX52 303 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 RAB26Q9ULW5 256 aa11.01□□□□□ -0.65
SMPD4-216ENST00000461187 TRBV7-1A0A0A6YYK4 115 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 MFSD2BA6NFX1 497 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 FCGR2CP31995 323 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 OR2B8PP59922 312 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 TM4SF20Q53R12 229 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 ZNF773Q6PK81 442 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 SPAG16Q8N0X2 631 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 BEST4Q8NFU0 473 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 OR13F1Q8NGS4 319 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 OR4A5Q8NH83 315 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 SSR3Q9UNL2 185 aa11□□□□□ -0.65
SMPD4-216ENST00000461187 TRAV3A0A0B4J244 114 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMPD4-216ENST00000461187 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
SMPD4-216ENST00000461187 PPYP01298 95 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 CLEC3BP05452 202 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 C8orf88P0DMB2 117 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 DEFA4P12838 97 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 SDC2P34741 201 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 ARPC4P59998 168 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 BTNL8Q6UX41 500 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 HOGA1Q86XE5 327 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 ZBTB34Q8NCN2 500 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 OR5H6Q8NGV6 325 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 SLC25A38Q96DW6 304 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 CXorf58Q96LI9 332 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 HRASLSQ9HDD0 168 aa10.99□□□□□ -0.65
SMPD4-216ENST00000461187 TRAV18A0A075B6X5 111 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 SULT1C2O00338 296 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 CLEC2LP0C7M8 214 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 SCAND1P57086 179 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 TAS2R31P59538 309 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 POU2AF1Q16633 256 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 ZNF502Q8TBZ5 544 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 FCGR1BQ92637 280 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 GGTLC1Q9BX51 225 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 SLC5A7Q9GZV3 580 aa10.98□□□□□ -0.65
SMPD4-216ENST00000461187 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-216ENST00000461187 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 UPK2O00526 184 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 HPRT1P00492 218 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 NQO2P16083 231 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 GPR183P32249 361 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 MXD1Q05195 221 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 ANKRD55Q3KP44 614 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 MARC2Q969Z3 335 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 RNF167Q9H6Y7 350 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
SMPD4-216ENST00000461187 ETV7Q9Y603 341 aa10.97□□□□□ -0.65
SMPD4-216ENST00000461187 A0A0A6YYH2 397 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 A6NJ64 397 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 FCER2P06734 321 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 FXYD4P59646 89 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 CATR1Q13166 79 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 ZNF585BQ52M93 769 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 OR10W1Q8NGF6 305 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 SRSF8Q9BRL6 282 aaKnown RBP10.96□□□□□ -0.65
SMPD4-216ENST00000461187 ZNF436Q9C0F3 470 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-216ENST00000461187 AUNIPQ9H7T9 357 aa10.96□□□□□ -0.65
SMPD4-216ENST00000461187 S1PR2O95136 353 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 FGF2P09038 288 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 PTBP1P26599 531 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMPD4-216ENST00000461187 ELLP55199 621 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-216ENST00000461187 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 PLET1Q6UQ28 207 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
SMPD4-216ENST00000461187 OR5AP2Q8NGF4 316 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 OR1L6Q8NGR2 347 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 OR51H1Q8NH63 302 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 GIMAP1Q8WWP7 306 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 QTRT1Q9BXR0 403 aaKnown RBP10.95□□□□□ -0.66
SMPD4-216ENST00000461187 COMMD5Q9GZQ3 224 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 PLEKHA2Q9HB19 425 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 TMEM140Q9NV12 185 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 UFC1Q9Y3C8 167 aa10.95□□□□□ -0.66
SMPD4-216ENST00000461187 FRAS1Q86XX4 4008 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 TGOLN2O43493 480 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 OR2C3Q8N628 320 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 GDPD1Q8N9F7 314 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 DMBX1Q8NFW5 382 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 CD300LFQ8TDQ1 290 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 YTHDF1Q9BYJ9 559 aaKnown RBP10.94□□□□□ -0.66
SMPD4-216ENST00000461187 C5orf66Q9H5L9 145 aa10.94□□□□□ -0.66
SMPD4-216ENST00000461187 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms