RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 KHDC3LQ587J8 217 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 TMEM268Q5VZI3 342 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 C8orf31Q8N9H6 132 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 OR4P4Q8NGL7 312 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 SCRT1Q9BWW7 348 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 MEGF9Q9H1U4 602 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 TAF9BQ9HBM6 251 aa8.98□□□□□ -0.97
APTX-209ENST00000460940 A0A1B0GW64 132 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 TGOLN2O43493 480 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 PMP2P02689 132 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 GAPDHP04406 335 aaKnown RBP8.97□□□□□ -0.97
APTX-209ENST00000460940 LINC00614P0C842 121 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 CEACAM3P40198 252 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 IER3P46695 156 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 TAS2R31P59538 309 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 HTD2P86397 168 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 PPP1R1AQ13522 171 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 USF2Q15853 346 aaPredicted RBP8.97□□□□□ -0.97
APTX-209ENST00000460940 TERB2Q8NHR7 220 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 FAM216AQ8WUB2 273 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 DPM3Q9P2X0 92 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 JPT1Q9UK76 154 aa8.97□□□□□ -0.97
APTX-209ENST00000460940 A0A087WWC5 75 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 OOSP1A8MZH6 123 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 ZNF736B4DX44 427 aaPredicted RBP8.96□□□□□ -0.97
APTX-209ENST00000460940 GSTP1P09211 210 aaKnown RBP8.96□□□□□ -0.97
APTX-209ENST00000460940 PET100P0DJ07 73 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 GNB3P16520 340 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 SNCAP37840 140 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.97
APTX-209ENST00000460940 LOXL3P58215 753 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 LTC4SQ16873 150 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 LRRC75BQ2VPJ9 315 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 Q6ZRG5 221 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 LHFPL4Q7Z7J7 247 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 MRPL52Q86TS9 123 aaKnown RBP8.96□□□□□ -0.97
APTX-209ENST00000460940 OR1L1Q8NH94 360 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 RNASEH2CQ8TDP1 164 aaKnown RBP8.96□□□□□ -0.97
APTX-209ENST00000460940 DTD1Q8TEA8 209 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 GALMQ96C23 342 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 CYYR1Q96J86 154 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 GNG12Q9UBI6 72 aa8.96□□□□□ -0.97
APTX-209ENST00000460940 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 H0YIZ8 118 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 BUB1B-PAK6H3BSN5 160 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 J3QR06 171 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 M0QYG6 137 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 OR8U9P0C7N5 309 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 DYNLT3P51808 116 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 RPL15P61313 204 aaKnown RBP8.96□□□□□ -0.98
APTX-209ENST00000460940 HLA-DRB3P79483 266 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 KRTAP24-1Q3LI83 254 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 LINC00311Q8N616 119 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 OR8U1Q8NH10 309 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 HDHD3Q9BSH5 251 aaPredicted RBP8.96□□□□□ -0.98
APTX-209ENST00000460940 Q9N2K0 584 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 VPREB3Q9UKI3 123 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 PSG11Q9UQ72 335 aa8.96□□□□□ -0.98
APTX-209ENST00000460940 MEIS3P1A6NDR6 274 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 C5orf51A6NDU8 294 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 RNF212BA8MTL3 300 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 IGHV4-59P01825 116 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 DTYMKP23919 212 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 ARFRP1Q13795 201 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 CLINT1Q14677 625 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
APTX-209ENST00000460940 SRSF7Q16629 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
APTX-209ENST00000460940 GUK1Q16774 197 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
APTX-209ENST00000460940 CCDC144NLQ6NUI1 221 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 Q6ZPA2 131 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 LIAT1Q6ZQX7 453 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HSD17B11Q8NBQ5 300 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 OR10X1Q8NGY0 326 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 UBALD1Q8TB05 177 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
APTX-209ENST00000460940 SMCO3A2RU48 225 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 MSGN1A6NI15 193 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 TRDCB7Z8K6 153 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 DIRAS3O95661 229 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 TSPAN15O95858 294 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 METTL15P1P0C7V9 234 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 IL3RAP26951 378 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 G0S2P27469 103 aa8.94□□□□□ -0.98
APTX-209ENST00000460940 SRSF2Q01130 221 aaKnown RBP8.94□□□□□ -0.98
APTX-209ENST00000460940 LDLRAD2Q5SZI1 272 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms