RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CSMD3Q7Z407 3707 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 IGLV11-55A0A075B6I3 123 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 A8MWP6 167 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 SULT1C2O00338 296 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 NDUFB8O95169 186 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 HLA-AP01891 365 aaKnown RBP17.2■□□□□ 0.34
PTPN4-207ENST00000460162 IFNA6P05013 189 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 NQO2P16083 231 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 DEFB114Q30KQ6 69 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 CLEC19AQ6UXS0 136 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 ZNF818PQ6ZRF7 136 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 CD300LFQ8TDQ1 290 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 CEPT1Q9Y6K0 416 aa17.2■□□□□ 0.34
PTPN4-207ENST00000460162 CGB1A6NKQ9 187 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 ZNF785A8K8V0 405 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 XRCC3O43542 346 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 OR2C1O95371 312 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 FCER2P06734 321 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 DEFA4P12838 97 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 MYOD1P15172 320 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 OR2B8PP59922 312 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 HERV-K104P61576 105 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 LINC00322Q6ZN03 302 aaPredicted RBP17.19■□□□□ 0.34
PTPN4-207ENST00000460162 TMEM17Q86X19 198 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 CXorf58Q96LI9 332 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 SRSF8Q9BRL6 282 aaKnown RBP17.19■□□□□ 0.34
PTPN4-207ENST00000460162 PLEKHA2Q9HB19 425 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 IFT46Q9NQC8 304 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 COMMD9Q9P000 198 aa17.19■□□□□ 0.34
PTPN4-207ENST00000460162 TENM2Q9NT68 2774 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 IGHV3-23P01764 117 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 EDN2P20800 178 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 UBE2NLQ5JXB2 153 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 AADACL3Q5VUY0 350 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 OR51H1Q8NH63 302 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 COMMD5Q9GZQ3 224 aa17.18■□□□□ 0.34
PTPN4-207ENST00000460162 TRBV7-1A0A0A6YYK4 115 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 IGLC7A0M8Q6 106 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 REG1AP05451 166 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 CD7P09564 240 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 FAM106AQ4KMX7 169 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 ZFAND6Q6FIF0 208 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 THOC7Q6I9Y2 204 aaKnown RBP17.17■□□□□ 0.34
PTPN4-207ENST00000460162 S100A16Q96FQ6 103 aaKnown RBP17.17■□□□□ 0.34
PTPN4-207ENST00000460162 TMEM140Q9NV12 185 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 EHFQ9NZC4 300 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 ANAPC10Q9UM13 185 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 S4R3C0 116 aa17.17■□□□□ 0.34
PTPN4-207ENST00000460162 TMEM213A2RRL7 107 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 MEIS3P1A6NDR6 274 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 MFSD2BA6NFX1 497 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 UPK2O00526 184 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 S1PR2O95136 353 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 CBLN1P23435 193 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 GUCA2BQ16661 112 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 DMBX1Q8NFW5 382 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 LYSTQ99698 3801 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 SACSQ9NZJ4 4579 aa17.16■□□□□ 0.34
PTPN4-207ENST00000460162 LCE6AA0A183 80 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 CACNG8Q8WXS5 425 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 MOB3AQ96BX8 217 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 WDR89Q96FK6 387 aaPredicted RBP17.15■□□□□ 0.34
PTPN4-207ENST00000460162 QTRT1Q9BXR0 403 aaKnown RBP17.15■□□□□ 0.34
PTPN4-207ENST00000460162 HIPK2Q9H2X6 1198 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 THYN1Q9P016 225 aa17.15■□□□□ 0.34
PTPN4-207ENST00000460162 TRAV3A0A0B4J244 114 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 ZNF320A2RRD8 509 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 GNRHRP30968 328 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 TGFBR1P36897 503 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 TAS2R46P59540 309 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 TAS2R20P59543 309 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 ERVK-16P61578 105 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 SLC16A13Q7RTY0 426 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 HSD17B13Q7Z5P4 300 aaPredicted RBP17.14■□□□□ 0.33
PTPN4-207ENST00000460162 DEFB125Q8N687 156 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 WFDC10AQ9H1F0 79 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 SRD5A3Q9H8P0 318 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 VCX3AQ9NNX9 186 aa17.14■□□□□ 0.33
PTPN4-207ENST00000460162 MARCH11A6NNE9 402 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 OR11H12B2RN74 326 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 CYB5BO43169 146 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 RLN1P04808 185 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 ZNF57Q68EA5 555 aaPredicted RBP17.13■□□□□ 0.33
PTPN4-207ENST00000460162 DHRS11Q6UWP2 260 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 TMEM61Q8N0U2 210 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 SAMD12Q8N8I0 201 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 ZNF502Q8TBZ5 544 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 ZNF2Q9BSG1 426 aaPredicted RBP17.13■□□□□ 0.33
PTPN4-207ENST00000460162 RETNQ9HD89 108 aa17.13■□□□□ 0.33
PTPN4-207ENST00000460162 CLEC3BP05452 202 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 NAT1P18440 290 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 F2RP25116 425 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 GPR183P32249 361 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 RPS19P39019 145 aaKnown RBP17.12■□□□□ 0.33
PTPN4-207ENST00000460162 GDPD1Q8N9F7 314 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 OR5H2Q8NGV7 314 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 MARC2Q969Z3 335 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 YIPF6Q96EC8 236 aa17.12■□□□□ 0.33
PTPN4-207ENST00000460162 MLXQ9UH92 298 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms