RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ZNF714Q96N38 554 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 TSPAN2O60636 221 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 SERF1AO75920 110 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 APOMO95445 188 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 IGHMP01871 453 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 RPL23P62829 140 aaKnown RBP8.34□□□□□ -1.07
UFD1-205ENST00000459854 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
UFD1-205ENST00000459854 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 NR2C2APQ86WQ0 139 aa8.34□□□□□ -1.07
UFD1-205ENST00000459854 RANBP2P49792 3224 aaKnown RBP8.34□□□□□ -1.07
UFD1-205ENST00000459854 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 A8MWV9 139 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 CRXO43186 299 aaPredicted RBP8.34□□□□□ -1.08
UFD1-205ENST00000459854 CRYBB3P26998 211 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 ZNF146Q15072 292 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 MOGAT3Q86VF5 341 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 RAB1BQ9H0U4 201 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 FBLN5Q9UBX5 448 aa8.34□□□□□ -1.08
UFD1-205ENST00000459854 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 IGHV1-69-2A0A0G2JMI3 117 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 MGST3O14880 152 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 SPRY3O43610 288 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 ICAM4Q14773 271 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 GAGE13Q4V321 117 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 FAM222BQ8WU58 562 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 REG4Q9BYZ8 158 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 DEFB127Q9H1M4 99 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 A0A0G2JK05 382 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 MGAT2Q10469 447 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 ZXDCQ2QGD7 858 aaPredicted RBP8.33□□□□□ -1.08
UFD1-205ENST00000459854 MIC13Q5XKP0 118 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 APOBEC4Q8WW27 367 aaKnown RBP8.33□□□□□ -1.08
UFD1-205ENST00000459854 ASCC3Q8N3C0 2202 aaKnown RBP8.33□□□□□ -1.08
UFD1-205ENST00000459854 ANOS1P23352 680 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 SOX8P57073 446 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 TM2D1Q9BX74 207 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 RNF7Q9UBF6 113 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 CHD7Q9P2D1 2997 aa8.33□□□□□ -1.08
UFD1-205ENST00000459854 IGLV1-36A0A0B4J1U3 117 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 TRAV8-4A0A0B4J246 113 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 H7C2G1 150 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 AMBPP02760 352 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 FOXL1Q12952 345 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 CCDC144NLQ6NUI1 221 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 HEXA-AS1Q9H8Q6 139 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 FOXD3Q9UJU5 478 aaPredicted RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 UMODP07911 640 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 SPINK2P20155 84 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 BTCP35070 178 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 KIAA1644Q3SXP7 199 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 INO80CQ6PI98 192 aaPredicted RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 MGST2Q99735 147 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 WNT5BQ9H1J7 359 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 A0A1W2PP11 408 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 UCP1P25874 307 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 TDGF1P3P51864 188 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 ERVK11-1P61568 191 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 DMRTC1Q5HYR2 192 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 ZNF418Q8TF45 676 aaPredicted RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 SLC25A10Q9UBX3 287 aaPredicted RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 K7N7A8 449 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
UFD1-205ENST00000459854 TMEM208Q9BTX3 173 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
UFD1-205ENST00000459854 C9orf172C9J069 976 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 SMIM10L1P0DMW3 83 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 FXYD3Q14802 87 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 SMIM10Q96HG1 83 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 J3QW42 95 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RAMP1O60894 148 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 COX5BP10606 129 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 OTX1P32242 354 aaPredicted RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 CCL20P78556 96 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RTP5Q14D33 572 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 SAMD5Q5TGI4 173 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 DNM1P46Q6ZS02 220 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 DIRC2Q96SL1 478 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 NABP2Q9BQ15 211 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 YAE1D1Q9NRH1 226 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 JPT1Q9UK76 154 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 OTOGLQ3ZCN5 2332 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 TRBV6-7A0A0A0MS04 114 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 TMEM8BA6NDV4 472 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 APOHP02749 345 aaPredicted RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 PRSS2P07478 247 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RPL27AP46776 148 aaKnown RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 RIPPLY3P57055 190 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 TGIF1Q15583 401 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 RNASEH2CQ8TDP1 164 aaKnown RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 A0A1W2PS18 150 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms