RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FAM106AQ4KMX7 169 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 C10orf55Q5SWW7 151 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 AADACL3Q5VUY0 350 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 VKORC1L1Q8N0U8 176 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 OR1L6Q8NGR2 347 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 GPX8Q8TED1 209 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 C15orf40Q8WUR7 153 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 AP3S1Q92572 193 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 EEF1AKMT3Q96AZ1 226 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 FANCD2OSQ96PS1 177 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 HRASLSQ9HDD0 168 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 FKBP11Q9NYL4 201 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 FBXL7Q9UJT9 491 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 DMRT1Q9Y5R6 373 aa7.61□□□□□ -1.19
HDLBP-228ENST00000459788 IGLV11-55A0A075B6I3 123 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 A0A1B0GW64 132 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 HMX3A6NHT5 357 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 MARCH11A6NNE9 402 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 E7EUB6 86 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 GPR31O00270 319 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 TNFSF12O43508 249 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 PGLYRP1O75594 196 aaPredicted RBP7.6□□□□□ -1.19
HDLBP-228ENST00000459788 OR2J3O76001 311 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 TRBV12-3P01733 135 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 APELAP0DMC3 54 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 IGHV4-30-4P0DP06 118 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 DEFA4P12838 97 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 RCVRNP35243 200 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 RORCP51449 518 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 ELLP55199 621 aaPredicted RBP7.6□□□□□ -1.19
HDLBP-228ENST00000459788 UCP3P55916 312 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 FXYD4P59646 89 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 MZT2AQ6P582 158 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 TMEM17Q86X19 198 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 DMBX1Q8NFW5 382 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 OR1L8Q8NGR8 309 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 VN1R17PQ8TDU5 208 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 MARC2Q969Z3 335 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 DGCR14Q96DF8 476 aaKnown RBP7.6□□□□□ -1.19
HDLBP-228ENST00000459788 RCHY1Q96PM5 261 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 TSC22D3Q99576 134 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 ASCL2Q99929 193 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 ZNF2Q9BSG1 426 aaPredicted RBP7.6□□□□□ -1.19
HDLBP-228ENST00000459788 FUNDC2Q9BWH2 189 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 QTRT1Q9BXR0 403 aaKnown RBP7.6□□□□□ -1.19
HDLBP-228ENST00000459788 ZC4H2Q9NQZ6 224 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 TMEM140Q9NV12 185 aa7.6□□□□□ -1.19
HDLBP-228ENST00000459788 IGLC7A0M8Q6 106 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 CGB1A6NKQ9 187 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 PRH1P02810 166 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 TRAPPC2P0DI81 140 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 TRAPPC2BP0DI82 140 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 PTHLHP12272 177 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 AREGP15514 252 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 TBPP20226 339 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDLBP-228ENST00000459788 ARL3P36405 182 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 RFX2P48378 723 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 SSX9Q7RTT3 188 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 LYSMD2Q8IV50 215 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 GDPD1Q8N9F7 314 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 OR5B3Q8NH48 314 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 OR51H1Q8NH63 302 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 ZNF486Q96H40 463 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-228ENST00000459788 CITED4Q96RK1 184 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 PALMDQ9NP74 551 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 SLC2A8Q9NY64 477 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
HDLBP-228ENST00000459788 TRAV25A0A0B4J276 109 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 SNAPC5O75971 98 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 S1PR2O95136 353 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 GABARAPO95166 117 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 NDUFB8O95169 186 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 PMP2P02689 132 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 EIF4EP06730 217 aaKnown RBP7.58□□□□□ -1.2
HDLBP-228ENST00000459788 SERPINE2P07093 398 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 RPA2P15927 270 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 HRH1P35367 487 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 TGFBR1P36897 503 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 LSM3P62310 102 aaKnown RBP7.58□□□□□ -1.2
HDLBP-228ENST00000459788 DEFB114Q30KQ6 69 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 SPSB3Q6PJ21 355 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 SLC38A6Q8IZM9 456 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 MUC7Q8TAX7 377 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 ZNF502Q8TBZ5 544 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 DYNLRB2Q8TF09 96 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 LSM10Q969L4 123 aaKnown RBP7.58□□□□□ -1.2
HDLBP-228ENST00000459788 CCDC140Q96MF4 163 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 TMEM56Q96MV1 263 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 NDUFA4L2Q9NRX3 87 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 GAR1Q9NY12 217 aaKnown RBP7.58□□□□□ -1.2
HDLBP-228ENST00000459788 COMMD3Q9UBI1 195 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 RABL2AQ9UBK7 228 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-228ENST00000459788 RABL2BQ9UNT1 228 aa7.58□□□□□ -1.2
HDLBP-228ENST00000459788 TEX50A0A1B0GTY4 177 aa7.57□□□□□ -1.2
HDLBP-228ENST00000459788 MEIS3P1A6NDR6 274 aa7.57□□□□□ -1.2
HDLBP-228ENST00000459788 RLN1P04808 185 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms