RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 HRASLSQ9HDD0 168 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 SLC2A9Q9NRM0 540 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 COMMD9Q9P000 198 aa12.36□□□□□ -0.43
COL7A1-203ENST00000459756 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
COL7A1-203ENST00000459756 FGF2P09038 288 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 TNFSF8P32971 234 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 S100A5P33763 92 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 TSPAN5P62079 268 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 OR52I2Q8NH67 350 aa12.35□□□□□ -0.43
COL7A1-203ENST00000459756 A0A1B0GW64 132 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 E7EUB6 86 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 GPR31O00270 319 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 TPPPO94811 219 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 DHFRP00374 187 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 TRBV12-3P01733 135 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 RLN1P04808 185 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 CRYGCP07315 174 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 SPNP16150 400 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 F2RP25116 425 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
COL7A1-203ENST00000459756 TATDN3Q17R31 274 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 RPEL1Q2QD12 228 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 LPCAT3Q6P1A2 487 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 OR9G4Q8NGQ1 327 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 FCAMRQ8WWV6 532 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 FXYD6Q9H0Q3 95 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 KLK11Q9UBX7 282 aa12.34□□□□□ -0.43
COL7A1-203ENST00000459756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.33□□□□□ -0.44
COL7A1-203ENST00000459756 FABP12A6NFH5 140 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 UPK2O00526 184 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 OR2J3O76001 311 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 S1PR2O95136 353 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 AREGP15514 252 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 PSMB6P28072 239 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 S100GP29377 79 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 ERVK-16P61578 105 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 C15orf32Q32M92 178 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 C15orf40Q8WUR7 153 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 COMMD5Q9GZQ3 224 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 SMAD5-AS1Q9Y6J3 95 aa12.33□□□□□ -0.44
COL7A1-203ENST00000459756 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
COL7A1-203ENST00000459756 GP9P14770 177 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 OR2B8PP59922 312 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 KLK9Q2XQG4 91 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 C11orf87Q6NUJ2 197 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 CADM3Q8N126 398 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 SRSF8Q9BRL6 282 aaKnown RBP12.32□□□□□ -0.44
COL7A1-203ENST00000459756 FBXL7Q9UJT9 491 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 KLK9Q9UKQ9 250 aa12.32□□□□□ -0.44
COL7A1-203ENST00000459756 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 MARCH11A6NNE9 402 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 M0QYG6 137 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 BMPR1BO00238 502 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 MYOD1P15172 320 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
COL7A1-203ENST00000459756 CTRB1P17538 263 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 LPAR6P43657 344 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 UCP3P55916 312 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 CTRB2Q6GPI1 263 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 IL34Q6ZMJ4 242 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 FANCD2OSQ96PS1 177 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 QTRT1Q9BXR0 403 aaKnown RBP12.31□□□□□ -0.44
COL7A1-203ENST00000459756 FAM212BQ9NTI7 297 aaPredicted RBP12.31□□□□□ -0.44
COL7A1-203ENST00000459756 SIGLEC8Q9NYZ4 499 aa12.31□□□□□ -0.44
COL7A1-203ENST00000459756 A6NHS1 94 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 DEFA4P12838 97 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 TBPP20226 339 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
COL7A1-203ENST00000459756 C19orf35Q6ZS72 473 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
COL7A1-203ENST00000459756 IGLC7A0M8Q6 106 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 NDUFB8O95169 186 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 KRASP01116 189 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 CD3DP04234 171 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 IFNA6P05013 189 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 REG1AP05451 166 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 CSN3P07498 182 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 RPA2P15927 270 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
COL7A1-203ENST00000459756 CNPY1Q3B7I2 92 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 RNASE10Q5GAN6 216 aaKnown RBP12.29□□□□□ -0.44
COL7A1-203ENST00000459756 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-203ENST00000459756 HAPLN4Q86UW8 402 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 MTFP1Q9UDX5 166 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 V9GYH0 126 aa12.29□□□□□ -0.44
COL7A1-203ENST00000459756 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms