RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OTOGLQ3ZCN5 2332 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 FAM208BQ5VWN6 2430 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 TRBV9A0A0B4J1U6 114 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 TRAV38-1A0A0B4J264 116 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 A0A1W2PN81 502 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 PHOX2AO14813 284 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 CEACAM8P31997 349 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-202ENST00000459727 CHRNA7P36544 502 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 PKIAP61925 76 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 PRCDQ00LT1 54 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 C17orf58Q2M2W7 97 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 OR4A47Q6IF82 309 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 SLC25A48Q6ZT89 311 aaKnown RBP7.3□□□□□ -1.24
HDAC3-202ENST00000459727 SSX9Q7RTT3 188 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 ASCL5Q7RTU5 278 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 Q8N7P7 452 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 OR1L8Q8NGR8 309 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 FAM57AQ8TBR7 257 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 ABHD5Q8WTS1 349 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 CACNG8Q8WXS5 425 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 MGST2Q99735 147 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 MRPL32Q9BYC8 188 aaKnown RBP7.3□□□□□ -1.24
HDAC3-202ENST00000459727 MS4A5Q9H3V2 200 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 BET1LQ9NYM9 111 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 RPUSD1Q9UJJ7 312 aaKnown RBP7.3□□□□□ -1.24
HDAC3-202ENST00000459727 WDFY3Q8IZQ1 3526 aa7.3□□□□□ -1.24
HDAC3-202ENST00000459727 SAA2-SAA4A0A096LPE2 208 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SPAARA0A1B0GVQ0 90 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 A0A1W2PPQ1 181 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 XKRY2A2RUG3 117 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 C3orf80F5H4A9 247 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 UPK2O00526 184 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SPRY3O43610 288 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SOD3P08294 240 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SAA2P0DJI9 122 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 GCHFRP30047 84 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 DEFA6Q01524 100 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 LTC4SQ16873 150 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 LBHQ53QV2 105 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 C2orf83Q53S99 150 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 RPL39P5Q59GN2 51 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 ZNF474Q6S9Z5 364 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 ZNF788Q6ZQV5 615 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SEM1Q6ZVN7 128 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM144Q7Z5S9 345 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 LYG1Q8N1E2 194 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 ZNF439Q8NDP4 499 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 NEUROG1Q92886 237 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SFRP2Q96HF1 295 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 HIST1H2BLQ99880 126 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 GCM1Q9NP62 436 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 NGBQ9NPG2 151 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
HDAC3-202ENST00000459727 OR51B2Q9Y5P1 312 aa7.29□□□□□ -1.24
HDAC3-202ENST00000459727 FRYQ5TBA9 3013 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 FREM1Q5H8C1 2179 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV3OR15-7A0A075B7D8 119 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 MKRN2OSH3BPM6 223 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 J3QR06 171 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 RRHO14718 337 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PROP1O75360 226 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 FABP4P15090 132 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 USF1P22415 310 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 CD40P25942 277 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 GPX4P36969 197 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 CNN1P51911 297 aaKnown RBP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 SUB1P53999 127 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 GNB1P62873 340 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PRR20EP86478 221 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PRR20CP86479 221 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PRR20DP86480 221 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PRR20BP86481 221 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 PRR20AP86496 221 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 EFNB3Q15768 340 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 CT45A1Q5HYN5 189 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 STPG3Q8N7X2 389 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 ZNRF1Q8ND25 227 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 OR10G8Q8NGN5 311 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 CT45A3Q8NHU0 189 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 NOL4LQ96MY1 436 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 GAFA1Q96PS6 74 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 DCTN5Q9BTE1 182 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 GPR61Q9BZJ8 451 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 ZMAT5Q9UDW3 170 aaKnown RBP7.28□□□□□ -1.24
HDAC3-202ENST00000459727 FAM215AQ9Y5M1 114 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 CEP295Q9C0D2 2601 aa7.28□□□□□ -1.24
HDAC3-202ENST00000459727 GPR179Q6PRD1 2367 aa7.27□□□□□ -1.24
HDAC3-202ENST00000459727 RTTNQ86VV8 2226 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 PRRG2O14669 202 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 NDUFB4O95168 129 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms