RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 COQ4Q9Y3A0 265 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 KIF15Q9NS87 1388 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 BRWD1Q9NSI6 2320 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 IGHV1-69-2A0A0G2JMI3 117 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 IRGMA1A4Y4 181 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 ERICH2A1L162 156 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 TMEM212A6NML5 194 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 HSBP1L1C9JCN9 74 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 LST1O00453 97 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 NDUFS6O75380 124 aaKnown RBP0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 PMP2P02689 132 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 METTL15P1P0C7V9 234 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 NFYAP23511 347 aaPredicted RBP0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 FXYD2P54710 66 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 POLR2GP62487 172 aaKnown RBP eCLIP0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 TNFAIP8L3Q5GJ75 292 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 FAM78BQ5VT40 261 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 OR4C6Q8NH72 309 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 ANKRD7Q92527 254 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 SMIM19Q96E16 107 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 DCUN1D5Q9BTE7 237 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 CHMP4BQ9H444 224 aaKnown RBP0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 WDR54Q9H977 334 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 CXorf21Q9HAI6 301 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 OR5AC2Q9NZP5 309 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 AK3Q9UIJ7 227 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 BAIAP2Q9UQB8 552 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 FREM1Q5H8C1 2179 aa0.38□□□□□ -2.35
SCARNA18-201ENST00000459004 TRAV14DV4A0A0A6YYC5 116 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 C21orf140B9A014 251 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 BIRC5O15392 142 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 HLA-DRAP01903 254 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 HLA-DMBP28068 263 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 CDC34P49427 236 aaPredicted RBP0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 MGAT3Q09327 533 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 ZNF345Q14585 488 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 TNFAIP8L2Q6P589 184 aaPredicted RBP0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 OR1M1Q8NGA1 313 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 ERMAPQ96PL5 475 aaPredicted RBP0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 OR8D2Q9GZM6 311 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 NDEL1Q9GZM8 345 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 POLR1DQ9Y2S0 133 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 INTS1Q8N201 2190 aaKnown RBP0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 BAZ2BQ9UIF8 2168 aaKnown RBP0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 RAD50Q92878 1312 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 COL4A5P29400 1685 aa0.37□□□□□ -2.35
SCARNA18-201ENST00000459004 TNRC6BQ9UPQ9 1833 aaKnown RBP0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 CACNA1BQ00975 2339 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 A0A087WX48 190 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 OR4C45A6NMZ5 311 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 DISC1C4P0D8 188 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 I3L521 148 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 IGHV3-7P01780 117 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 C1QAP02745 245 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 SHBGP04278 402 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 UGT2B7P16662 529 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 S100A7P31151 101 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 OR4D2P58180 307 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 TNFAIP6P98066 277 aaPredicted RBP0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 RUNX1Q01196 453 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 C1orf194Q5T5A4 169 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 FUNDC1Q8IVP5 155 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 TMEM251Q8N6I4 163 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 AQP3Q92482 292 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 FKBP14Q9NWM8 211 aa0.36□□□□□ -2.35
SCARNA18-201ENST00000459004 CUL9Q8IWT3 2517 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 POLEQ07864 2286 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 TRBV6-7A0A0A0MS04 114 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 FUOMA2VDF0 154 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 GGT3PA6NGU5 568 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 GOLGA8MH3BSY2 632 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 NOS1APO75052 506 aaPredicted RBP0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 IL3P08700 152 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 SRP19P09132 144 aaKnown RBP0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 OCMP0CE72 109 aaPredicted RBP0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 FGF6P10767 208 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 CCL1P22362 96 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 ZNF846Q147U1 533 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 CLEC6AQ6EIG7 209 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 HIST2H3AQ71DI3 136 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 SLC51BQ86UW2 128 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 Q8N402 240 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 OR5B17Q8NGF7 314 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 ROPN1LQ96C74 230 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 OR51I2Q9H344 312 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 PAQR5Q9NXK6 330 aaPredicted RBP0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 DKKL1Q9UK85 242 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 FUT9Q9Y231 359 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 PXMP4Q9Y6I8 212 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 LAMA4Q16363 1823 aa0.35□□□□□ -2.35
SCARNA18-201ENST00000459004 F5H768 121 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 YEATS4O95619 227 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 CLPSP04118 112 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 KRT7P08729 469 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 PSMB6P28072 239 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 ZNF80P51504 273 aaPredicted RBP0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 RPL18Q07020 188 aaKnown RBP0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 DMTNQ08495 405 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 FABP9Q0Z7S8 132 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms