RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 LPAR2Q9HBW0 351 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 BET1LQ9NYM9 111 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 DPM3Q9P2X0 92 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 TBL2Q9Y4P3 447 aaKnown RBP7.25□□□□□ -1.25
VPS50-207ENST00000458530 INSIG2Q9Y5U4 225 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.25□□□□□ -1.258e-11■■■■□ 22.1
VPS50-207ENST00000458530 TET2Q6N021 2002 aaPredicted RBP7.25□□□□□ -1.25
VPS50-207ENST00000458530 WNK2Q9Y3S1 2297 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 C15orf61A6NNL5 157 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 ODF3BA8MYP8 253 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 DFFBO76075 338 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 SPDEFO95238 335 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 IFNA17P01571 189 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 USF1P22415 310 aaPredicted RBP7.24□□□□□ -1.25
VPS50-207ENST00000458530 GATA3P23771 443 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 RPS16P62249 146 aaKnown RBP7.24□□□□□ -1.25
VPS50-207ENST00000458530 EWSR1Q01844 656 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS50-207ENST00000458530 EXOSC2Q13868 293 aaKnown RBP7.24□□□□□ -1.25
VPS50-207ENST00000458530 UTF1Q5T230 341 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 TPTE2P1Q5T6R2 138 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 OR4A47Q6IF82 309 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 SSX9Q7RTT3 188 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 OR4P4Q8NGL7 312 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 OR1S2Q8NGQ3 325 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 LRRC20Q8TCA0 184 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 DTD1Q8TEA8 209 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 SCARB1Q8WTV0 552 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 ST8SIA2Q92186 375 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 RNF5Q99942 180 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 MS4A7Q9GZW8 240 aaPredicted RBP7.24□□□□□ -1.25
VPS50-207ENST00000458530 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 HIPK2Q9H2X6 1198 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 RBKSQ9H477 322 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 SIRT7Q9NRC8 400 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 PSENENQ9NZ42 101 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 FOXA2Q9Y261 457 aaPredicted RBP7.24□□□□□ -1.25
VPS50-207ENST00000458530 ZNF257Q9Y2Q1 563 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 ARHGAP32A7KAX9 2087 aa7.24□□□□□ -1.25
VPS50-207ENST00000458530 IGHV1-3A0A0C4DH29 117 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 MSGN1A6NI15 193 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 KBTBD11O94819 623 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 NXPH3O95157 252 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
VPS50-207ENST00000458530 CD1BP29016 333 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 REG1BP48304 166 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 HOXA1P49639 335 aaPredicted RBP7.23□□□□□ -1.25
VPS50-207ENST00000458530 SULT1A1P50225 295 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 UBE2E1P51965 193 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 PAX2Q02962 417 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 IZUMO4Q1ZYL8 232 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 PDLIM3Q53GG5 364 aaPredicted RBP7.23□□□□□ -1.25
VPS50-207ENST00000458530 Q6ZRM9 215 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 MOB3BQ86TA1 216 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 BAP18Q8IXM2 172 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 TMEM252Q8N6L7 170 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 OR5B3Q8NH48 314 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 C11orf1Q9H5F2 150 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 TMEM14BQ9NUH8 114 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 ZNRD1Q9P1U0 126 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 FBXL17Q9UF56 701 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 STRAPQ9Y3F4 350 aaKnown RBP7.23□□□□□ -1.25
VPS50-207ENST00000458530 MGAM2Q2M2H8 2515 aa7.23□□□□□ -1.25
VPS50-207ENST00000458530 IGHV4-30-2A0A087WSY4 118 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 TRAV20A0A0B4J274 112 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 IGHV4-61A0A0C4DH41 118 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 B4DSR2 109 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 LY6LH3BQJ8 138 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 UPK2O00526 184 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 IFNA5P01569 189 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 IGKV1-16P04430 117 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 OR9G9P0C7N8 305 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 SAA1P0DJI8 122 aaPredicted RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 IAPPP10997 89 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 MAS1LP35410 378 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 F2RL1P55085 397 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 ATP5IP56385 69 aaPredicted RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 LINC00205P59089 165 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 OR2B8PP59922 312 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 HSPE1P61604 102 aaKnown RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 SPANXN5Q5MJ07 72 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 PUSL1Q8N0Z8 303 aaKnown RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 STPG2Q8N412 459 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 LILRB2Q8N423 598 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 TEX45Q8NA69 505 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 PINX1Q96BK5 328 aaKnown RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 QTRT1Q9BXR0 403 aaKnown RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 COMMD5Q9GZQ3 224 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 PLEKHA3Q9HB20 300 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 HEYLQ9NQ87 328 aaPredicted RBP7.22□□□□□ -1.25
VPS50-207ENST00000458530 TCF19Q9Y242 345 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 OR51B2Q9Y5P1 312 aa7.22□□□□□ -1.25
VPS50-207ENST00000458530 A0A1W2PN81 502 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 A0A1W2PPI3 338 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 IGSF23A1L1A6 192 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 FAM24AA6NFZ4 105 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 FAM157AC9JC47 383 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms