RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 MYOD1P15172 320 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 ARPC4P59998 168 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 TIMM50Q3ZCQ8 353 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 C19orf35Q6ZS72 473 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 SLC38A6Q8IZM9 456 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 CNBD2Q96M20 576 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 HRASLSQ9HDD0 168 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 UFC1Q9Y3C8 167 aa16.1■□□□□ 0.17
CPNE1-220ENST00000458038 ANKRD65E5RJM6 399 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 SCAF4O95104 1147 aaKnown RBP16.09■□□□□ 0.17
CPNE1-220ENST00000458038 SCAND1P57086 179 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 TAS2R31P59538 309 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 TM4SF20Q53R12 229 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 BTNL8Q6UX41 500 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 WFDC3Q8IUB2 231 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 OR1L6Q8NGR2 347 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 TXNL4BQ9NX01 149 aaKnown RBP16.09■□□□□ 0.17
CPNE1-220ENST00000458038 DAPK2Q9UIK4 370 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 TP53TG1Q9Y2A0 90 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 S4R3C0 116 aa16.09■□□□□ 0.17
CPNE1-220ENST00000458038 PTBP1P26599 531 aaKnown RBP eCLIP16.08■□□□□ 0.16
CPNE1-220ENST00000458038 OR2B8PP59922 312 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 GABARAPL2P60520 117 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 CATR1Q13166 79 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 POU2AF1Q16633 256 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 UBE2UQ5VVX9 321 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 THOC7Q6I9Y2 204 aaKnown RBP16.08■□□□□ 0.16
CPNE1-220ENST00000458038 Q6ZWC4 215 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 SPAG16Q8N0X2 631 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 BEST4Q8NFU0 473 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 CD300LFQ8TDQ1 290 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 SECTM1Q8WVN6 248 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 COMMD5Q9GZQ3 224 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 C5orf66Q9H5L9 145 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 RHBDL2Q9NX52 303 aa16.08■□□□□ 0.16
CPNE1-220ENST00000458038 SMIM30A4D0T7 59 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 MFSD2BA6NFX1 497 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 HPRT1P00492 218 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 REG1AP05451 166 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 NQO2P16083 231 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 FCGR2CP31995 323 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 APOC4P55056 127 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 ZNF585BQ52M93 769 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 PLET1Q6UQ28 207 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 IZUMO2Q6UXV1 221 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 HSD17B13Q7Z5P4 300 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-220ENST00000458038 OR2C3Q8N628 320 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 OR13F1Q8NGS4 319 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 ZNF502Q8TBZ5 544 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 LINC00476Q8WZB0 136 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 SPAG8Q99932 426 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-220ENST00000458038 CCL28Q9NRJ3 127 aa16.07■□□□□ 0.16
CPNE1-220ENST00000458038 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
CPNE1-220ENST00000458038 A0A0A6YYH2 397 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 NUPR2A6NF83 97 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 A6NJ64 397 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 CGB1A6NKQ9 187 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 UBE2CO00762 179 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 PPYP01298 95 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 ATF4P18848 351 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-220ENST00000458038 BMI1P35226 326 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 TNFRSF9Q07011 255 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 SFXN4Q6P4A7 337 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 FCGR1BQ92637 280 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 BORCS5Q969J3 196 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 ATP6V0BQ99437 205 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 ZNF436Q9C0F3 470 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-220ENST00000458038 SSR3Q9UNL2 185 aa16.06■□□□□ 0.16
CPNE1-220ENST00000458038 IGLC7A0M8Q6 106 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 UPK2O00526 184 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 TNFSF12O43508 249 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 GPR183P32249 361 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 LAMTOR1Q6IAA8 161 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 UNQ9165/PRO28630Q6UXU0 137 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 HOGA1Q86XE5 327 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 LGALS14Q8TCE9 139 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 GPHA2Q96T91 129 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 QTRT1Q9BXR0 403 aaKnown RBP16.05■□□□□ 0.16
CPNE1-220ENST00000458038 SLC5A7Q9GZV3 580 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 PLEKHA2Q9HB19 425 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 RAB26Q9ULW5 256 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 ETV7Q9Y603 341 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 HYDINQ4G0P3 5121 aa16.05■□□□□ 0.16
CPNE1-220ENST00000458038 PLECQ15149 4684 aaKnown RBP16.05■□□□□ 0.16
CPNE1-220ENST00000458038 CXorf65A6NEN9 183 aa16.04■□□□□ 0.16
CPNE1-220ENST00000458038 SPSB3Q6PJ21 355 aa16.04■□□□□ 0.16
CPNE1-220ENST00000458038 SELENOKQ9Y6D0 94 aa16.04■□□□□ 0.16
CPNE1-220ENST00000458038 ALMS1Q8TCU4 4167 aa16.04■□□□□ 0.16
CPNE1-220ENST00000458038 TRAV18A0A075B6X5 111 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 KIR2DL5BA0A0G2JN68 375 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 KIR2DL5BA0A0G2JPC4 375 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 SULT1C2O00338 296 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 TSPAN4O14817 238 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 TGOLN2O43493 480 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 SPRY2O43597 315 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 PSMB9P28065 219 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 CBX5P45973 191 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 KIR2DL5AQ8N109 375 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 DMBX1Q8NFW5 382 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms