RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 Q8WTZ3 238 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 CCL17Q92583 94 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 MS4A5Q9H3V2 200 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
CCDC43-202ENST00000457422 TLN1Q9Y490 2541 aaKnown RBP13.64□□□□□ -0.23
CCDC43-202ENST00000457422 KBTBD11O94819 623 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 CCL3L1P16619 93 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 RPL35P42766 123 aaKnown RBP13.63□□□□□ -0.23
CCDC43-202ENST00000457422 AKR1D1P51857 326 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 RND2P52198 227 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 MGST2Q99735 147 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 NPVFQ9HCQ7 196 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 NAT8Q9UHE5 227 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 UPK2O00526 184 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 UBE2CO00762 179 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 S100A6P06703 90 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 MYOD1P15172 320 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 TMEM200BQ69YZ2 307 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 GGTLC1Q9BX51 225 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 DYNLRB1Q9NP97 96 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 OR51B2Q9Y5P1 312 aa13.63□□□□□ -0.23
CCDC43-202ENST00000457422 ADGRG4Q8IZF6 3080 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 FNDC10F2Z333 226 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 YIF1AO95070 293 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 LYPD2Q6UXB3 125 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 SMIM7Q9BQ49 75 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 CTDSP1Q9GZU7 261 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 BET1LQ9NYM9 111 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 CLDN34H7C241 214 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 NDUFB3O43676 98 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 IGHV2-5P01817 119 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 CXCL1P09341 107 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 EFNB3Q15768 340 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 FAM71F2Q6NXP2 309 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 IQCF2Q8IXL9 164 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 ZNF596Q8TC21 504 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 H1FXQ92522 213 aaKnown RBP13.62□□□□□ -0.23
CCDC43-202ENST00000457422 C1orf159Q96HA4 380 aa13.62□□□□□ -0.23
CCDC43-202ENST00000457422 PKDREJQ9NTG1 2253 aa13.61□□□□□ -0.23
CCDC43-202ENST00000457422 SRRM4A7MD48 611 aaKnown RBP13.61□□□□□ -0.23
CCDC43-202ENST00000457422 ARSJQ5FYB0 599 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-202ENST00000457422 LINC00311Q8N616 119 aa13.61□□□□□ -0.23
CCDC43-202ENST00000457422 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
CCDC43-202ENST00000457422 METTL1Q9UBP6 276 aaKnown RBP13.61□□□□□ -0.23
CCDC43-202ENST00000457422 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
CCDC43-202ENST00000457422 J3QR06 171 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 CA2P00918 260 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 APOBEC3AP31941 199 aaPredicted RBP13.6□□□□□ -0.23
CCDC43-202ENST00000457422 RPS10P46783 165 aaKnown RBP13.6□□□□□ -0.23
CCDC43-202ENST00000457422 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
CCDC43-202ENST00000457422 TMEM241Q24JQ0 296 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 OR4F5Q8NH21 305 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 OR4F4Q96R69 305 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 HINT2Q9BX68 163 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 MRPL20Q9BYC9 149 aaKnown RBP13.6□□□□□ -0.23
CCDC43-202ENST00000457422 PARLQ9H300 379 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 FKBP11Q9NYL4 201 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 CTSZQ9UBR2 303 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 ARFGEF3Q5TH69 2177 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 ZNF98A6NK75 572 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 PAGE4O60829 102 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 APOA2P02652 100 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 TEPPQ6URK8 271 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 OR5B3Q8NH48 314 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
CCDC43-202ENST00000457422 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
CCDC43-202ENST00000457422 B9A039 149 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 MIC13Q5XKP0 118 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 TGIF2-C20orf24A0A0A6YYL0 155 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.59□□□□□ -0.23
CCDC43-202ENST00000457422 H0YJW9 148 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 DVL1O14640 695 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 KALRNO60229 2985 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 CD3EP07766 207 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 SAA1P0DJI8 122 aaPredicted RBP13.59□□□□□ -0.23
CCDC43-202ENST00000457422 LOXP28300 417 aaPredicted RBP13.59□□□□□ -0.23
CCDC43-202ENST00000457422 UCNP55089 124 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 DLX6P56179 175 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 ZNF674Q2M3X9 581 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 FBXL19-AS1Q494R0 122 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 TMEM177Q53S58 311 aa13.59□□□□□ -0.23
CCDC43-202ENST00000457422 RPUSD4Q96CM3 377 aaKnown RBP13.59□□□□□ -0.23
CCDC43-202ENST00000457422 A0A087X0M5 115 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 TEX50A0A1B0GTY4 177 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 A0A1B0GX30 115 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms