RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 A0A0J9YWU9 116 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 TNFSF12O43508 249 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 C8orf88P0DMB2 117 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
TVP23A-202ENST00000456096 OR1L6Q8NGR2 347 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 MARC2Q969Z3 335 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
TVP23A-202ENST00000456096 GPR183P32249 361 aa12.46□□□□□ -0.41
TVP23A-202ENST00000456096 GNG2P59768 71 aa12.46□□□□□ -0.41
TVP23A-202ENST00000456096 OR2B8PP59922 312 aa12.46□□□□□ -0.41
TVP23A-202ENST00000456096 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.41
TVP23A-202ENST00000456096 BET1LQ9NYM9 111 aa12.46□□□□□ -0.41
TVP23A-202ENST00000456096 MRPL27Q9P0M9 148 aaKnown RBP12.46□□□□□ -0.41
TVP23A-202ENST00000456096 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.42
TVP23A-202ENST00000456096 NOTOA8MTQ0 251 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 PTHLHP12272 177 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 GALP22466 123 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 TIMM50Q3ZCQ8 353 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 LYG2Q86SG7 212 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 OR4A5Q8NH83 315 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 SECTM1Q8WVN6 248 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
TVP23A-202ENST00000456096 TRAV3A0A0B4J244 114 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 NUPR2A6NF83 97 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 SPRY2O43597 315 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 FCGR2CP31995 323 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 ELLP55199 621 aaPredicted RBP12.44□□□□□ -0.42
TVP23A-202ENST00000456096 TNFRSF9Q07011 255 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 PLET1Q6UQ28 207 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 Q6ZWC4 215 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 WFDC3Q8IUB2 231 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 C5orf66Q9H5L9 145 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 UBQLN2Q9UHD9 624 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 UFC1Q9Y3C8 167 aa12.44□□□□□ -0.42
TVP23A-202ENST00000456096 SULT1C2O00338 296 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 SCGNO76038 276 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 BMI1P35226 326 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 APOC4P55056 127 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 ARPC4P59998 168 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 DEFB135Q30KP9 77 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
TVP23A-202ENST00000456096 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 OR13F1Q8NGS4 319 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 SPAG8Q99932 426 aaPredicted RBP12.43□□□□□ -0.42
TVP23A-202ENST00000456096 AIFM2Q9BRQ8 373 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
TVP23A-202ENST00000456096 TXNL4BQ9NX01 149 aaKnown RBP12.43□□□□□ -0.42
TVP23A-202ENST00000456096 BLOC1S6Q9UL45 172 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
TVP23A-202ENST00000456096 UPK2O00526 184 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
TVP23A-202ENST00000456096 TAS2R31P59538 309 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 MSMO1Q15800 293 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 GVQW1Q8N7I0 195 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 BEST4Q8NFU0 473 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 OR10W1Q8NGF6 305 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 COMMD5Q9GZQ3 224 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 THYN1Q9P016 225 aa12.42□□□□□ -0.42
TVP23A-202ENST00000456096 RBFOX2O43251 390 aaKnown RBP eCLIP12.41□□□□□ -0.42
TVP23A-202ENST00000456096 TGOLN2O43493 480 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 PPYP01298 95 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 RPA2P15927 270 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 NQO2P16083 231 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 FGF9P31371 208 aaPredicted RBP12.41□□□□□ -0.42
TVP23A-202ENST00000456096 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 SLC5A7Q9GZV3 580 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 RHBDL2Q9NX52 303 aa12.41□□□□□ -0.42
TVP23A-202ENST00000456096 RRP15Q9Y3B9 282 aaKnown RBP12.41□□□□□ -0.42
TVP23A-202ENST00000456096 TRAV18A0A075B6X5 111 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 OR2T8A6NH00 312 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 UBE2CO00762 179 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 TSPAN4O14817 238 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 HPRT1P00492 218 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 FXYD4P59646 89 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 ODF3L2Q3SX64 289 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 SFXN4Q6P4A7 337 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 HOGA1Q86XE5 327 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 VN1R17PQ8TDU5 208 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 RNF183Q96D59 192 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
TVP23A-202ENST00000456096 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
TVP23A-202ENST00000456096 TMEM140Q9NV12 185 aa12.4□□□□□ -0.42
TVP23A-202ENST00000456096 FCER2P06734 321 aa12.39□□□□□ -0.43
TVP23A-202ENST00000456096 RPL35AP18077 110 aaKnown RBP12.39□□□□□ -0.43
TVP23A-202ENST00000456096 CATR1Q13166 79 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms