RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NEU1Q99519 415 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 HEATR1Q9H583 2144 aaKnown RBP14.59□□□□□ -0.07
PTPN6-204ENST00000456013 TRGV10A0A0A0MS01 117 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 RPL29P47914 159 aaKnown RBP14.59□□□□□ -0.07
PTPN6-204ENST00000456013 SPATA31B1PQ5VZV4 182 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 DHRS13Q6UX07 377 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 C9orf106Q8NAJ2 232 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 OR2Z1Q8NG97 314 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 SNHG12Q9BXW3 62 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 TP53TG3Q9ULZ0 132 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 ZDBF2Q9HCK1 2354 aa14.59□□□□□ -0.07
PTPN6-204ENST00000456013 IGHV1-18A0A0C4DH31 117 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 GRIFINA4D1Z8 144 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 TCAPO15273 167 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 IGHV3-13P01766 116 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 IGHV3-7P01780 117 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 ESDP10768 282 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 NPY1RP25929 384 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 CFHR2P36980 270 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 PAFAH1B2P68402 229 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 HLA-DRB5Q30154 266 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 C1orf229Q6ZS94 237 aaPredicted RBP14.58□□□□□ -0.08
PTPN6-204ENST00000456013 ZCCHC14Q8WYQ9 949 aaKnown RBP14.58□□□□□ -0.08
PTPN6-204ENST00000456013 UHRF2Q96PU4 802 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 ITGB1BP1O14713 200 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 RAB31Q13636 194 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 SLC24A4Q8NFF2 622 aa14.58□□□□□ -0.08
PTPN6-204ENST00000456013 FOXA2Q9Y261 457 aaPredicted RBP14.58□□□□□ -0.08
PTPN6-204ENST00000456013 AREGP15514 252 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 CBLN1P23435 193 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 RAB7AP51149 207 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 HSPE1P61604 102 aaKnown RBP14.57□□□□□ -0.08
PTPN6-204ENST00000456013 HES3Q5TGS1 186 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 EAF1Q96JC9 268 aaPredicted RBP14.57□□□□□ -0.08
PTPN6-204ENST00000456013 MRPL18Q9H0U6 180 aaKnown RBP14.57□□□□□ -0.08
PTPN6-204ENST00000456013 CBLN4Q9NTU7 201 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 TMEM106BQ9NUM4 274 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 CALYQ9NYX4 217 aa14.57□□□□□ -0.08
PTPN6-204ENST00000456013 A8MXE2 369 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 SLC17A3O00476 420 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 CDX4O14627 284 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-204ENST00000456013 FOXH1O75593 365 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 LGALS4P56470 323 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 LINC00310P59036 64 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 TPPP2P59282 170 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PRR20EP86478 221 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PRR20CP86479 221 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PRR20DP86480 221 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PRR20BP86481 221 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PRR20AP86496 221 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 GCSAMQ8N6F7 178 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 TBX15Q96SF7 602 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 TMEM14BQ9NUH8 114 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 IGHV3OR15-7A0A075B7D8 119 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 ZNF705FA8MVS1 300 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-204ENST00000456013 M0R143 59 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 ZNF705DP0CH99 300 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-204ENST00000456013 ZNF705BP0CI00 300 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-204ENST00000456013 CGB3P0DN86 165 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 CGB7P0DN87 165 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 ZNRF1Q8ND25 227 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 PLSCR4Q9NRQ2 329 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 ARL2-SNX15V9GYD0 113 aa14.56□□□□□ -0.08
PTPN6-204ENST00000456013 URB1O60287 2271 aaKnown RBP14.56□□□□□ -0.08
PTPN6-204ENST00000456013 FNDC10F2Z333 226 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 CA2P00918 260 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 FOSL1P15407 271 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 CRISP2P16562 243 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 OR4A47Q6IF82 309 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-204ENST00000456013 OR4P4Q8NGL7 312 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 NEUROG1Q92886 237 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 ENY2Q9NPA8 101 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 DSCAML1Q8TD84 2053 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 Q6ZWC4 215 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 OR1L6Q8NGR2 347 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 CORO2AQ92828 525 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 SFXN3Q9BWM7 321 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 NCOR1P1Q9H4R4 102 aa14.55□□□□□ -0.08
PTPN6-204ENST00000456013 SLC25A10Q9UBX3 287 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-204ENST00000456013 PRR33A8MZF0 331 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 IGFBP2P18065 325 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 RANP62826 216 aaKnown RBP14.54□□□□□ -0.08
PTPN6-204ENST00000456013 RPEL1Q2QD12 228 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 CT45A1Q5HYN5 189 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 CT45A3Q8NHU0 189 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 CGAP01215 116 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 LINC00869P0C866 280 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 RAB4AP20338 218 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 ZNF124Q15973 351 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 MSMPQ1L6U9 139 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 C17orf58Q2M2W7 97 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 KRTCAP3Q53RY4 240 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 UTF1Q5T230 341 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 GUCD1Q96NT3 240 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 V9GYV3 84 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 CACNA1GO43497 2377 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 TANC2Q9HCD6 1990 aa14.54□□□□□ -0.08
PTPN6-204ENST00000456013 SAA2-SAA4A0A096LPE2 208 aa14.53□□□□□ -0.08
PTPN6-204ENST00000456013 SERF1AO75920 110 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms